RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 BTNL3Q6UXE8 466 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 ZNF841Q6ZN19 808 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 SEMA6DQ8NFY4 1073 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 OR2T27Q8NH04 317 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 LRRC29Q8WV35 223 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 RAB40AQ8WXH6 277 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 RNF170Q96K19 258 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 HRASLS5Q96KN8 279 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 C9orf16Q9BUW7 83 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 TLNRD1Q9H1K6 362 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 GPR84Q9NQS5 396 aa16.8■□□□□ 0.28
NUP88-204ENST00000572290 TMEM210A6NLX4 147 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 CDIPTO14735 213 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 FSHBP01225 129 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 TTRP02766 147 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 KRT8P05787 483 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 NPY4RP50391 375 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 PAX2Q02962 417 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 RIPPLY1Q0D2K3 151 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 TEX36Q5VZQ5 186 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 WDR82Q6UXN9 313 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 PLEKHG7Q6ZR37 379 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 KCTD8Q6ZWB6 473 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 KRT74Q7RTS7 529 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 SSX6Q7RTT6 188 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 THAP5Q7Z6K1 395 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 PQLC1Q8N2U9 271 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 OR10H4Q8NGA5 316 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 ZNF418Q8TF45 676 aaPredicted RBP16.79■□□□□ 0.28
NUP88-204ENST00000572290 HPSE2Q8WWQ2 592 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 UBE2FQ969M7 185 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 ERVK-18Q9QC07 812 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 OR52A1Q9UKL2 312 aa16.79■□□□□ 0.28
NUP88-204ENST00000572290 ATRQ13535 2644 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 A0A0A6YYJ9 748 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 IGHV2-70DA0A0C4DH43 119 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 A0A1W2PQL4 384 aaPredicted RBP16.78■□□□□ 0.28
NUP88-204ENST00000572290 TNFRSF13BO14836 293 aaPredicted RBP16.78■□□□□ 0.28
NUP88-204ENST00000572290 ADAM20O43506 726 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 GYPAP02724 150 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 CFHR2P36980 270 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 PAX8Q06710 450 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 ARMCX4Q5H9R4 360 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 BCL2L15Q5TBC7 163 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 ZBTB37Q5TC79 503 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 FAM90A1Q86YD7 464 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 ELMOD2Q8IZ81 293 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 YIPF7Q8N8F6 280 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 TECTBQ96PL2 329 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 FGF23Q9GZV9 251 aaPredicted RBP16.78■□□□□ 0.28
NUP88-204ENST00000572290 CTSZQ9UBR2 303 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP88-204ENST00000572290 SNX5Q9Y5X3 404 aa16.78■□□□□ 0.28
NUP88-204ENST00000572290 IGHV3OR15-7A0A075B7D8 119 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 METTL15A6NJ78 407 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 E9PQ18 207 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 ENTPD6O75354 484 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 MTRF1O75570 445 aaKnown RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 DHRS3O75911 302 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 RPP14O95059 124 aaKnown RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 SNRPGP62308 76 aaKnown RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 MICBQ29980 383 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 FAM76BQ5HYJ3 339 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 SLC25A30Q5SVS4 291 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 RPL3LQ92901 407 aaKnown RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 DACT3Q96B18 629 aaPredicted RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 MBOAT4Q96T53 435 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 NUDT16L1Q9BRJ7 211 aaKnown RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 C19orf24Q9BVV8 132 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.77■□□□□ 0.28
NUP88-204ENST00000572290 ENPP5Q9UJA9 477 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 PIGLQ9Y2B2 252 aa16.77■□□□□ 0.28
NUP88-204ENST00000572290 KIR2DS1A0A191URI9 304 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 MUC1P15941 1255 aaPredicted RBP16.76■□□□□ 0.27
NUP88-204ENST00000572290 FAHP16930 419 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 MTNR1AP48039 350 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 CEACAM21Q3KPI0 293 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 CEP78Q5JTW2 689 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 ZNF684Q5T5D7 378 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 MEDAGQ5VYS4 303 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 CD276Q5ZPR3 534 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 ZBTB49Q6ZSB9 765 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 MOB3CQ70IA8 216 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 BPIFB2Q8N4F0 458 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 SCCPDHQ8NBX0 429 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 OR10Z1Q8NGY1 313 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 SLC29A1Q99808 456 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 GMPPBQ9Y5P6 360 aa16.76■□□□□ 0.27
NUP88-204ENST00000572290 SRRM5B3KS81 715 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 ZNF732B4DXR9 585 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 P2RY10O00398 339 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 SULT1C4O75897 302 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 RGS9O75916 674 aaPredicted RBP16.75■□□□□ 0.27
NUP88-204ENST00000572290 VENTXO95231 258 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 BAG2O95816 211 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 FPR2P25090 351 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 GPM6AP51674 278 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 GNG3P63215 75 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 OCLNQ16625 522 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 KLF17Q5JT82 389 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms