RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SRD5A2P31213 254 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RPL13AP40429 203 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 RPS9P46781 194 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 RBP2P50120 134 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RAB7AP51149 207 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CRYBA2P53672 197 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 UGT2B15P54855 530 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CD81P60033 236 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RAB8AP61006 207 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 HBA1P69905 142 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 IL5RAQ01344 420 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 MVKQ03426 396 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PRDX1Q06830 199 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 PIGFQ07326 219 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 EXOSC7Q15024 291 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 DEFB133Q30KQ1 61 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CEACAM21Q3KPI0 293 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 C14orf28Q4W4Y0 310 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SPIN4Q56A73 249 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ESCO2Q56NI9 601 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RNASE10Q5GAN6 216 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 C6orf52Q5T4I8 152 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CPTPQ5TA50 214 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 AGAP7PQ5VUJ5 663 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR4C11Q6IEV9 310 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 TBPL2Q6SJ96 375 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZNF517Q6ZMY9 492 aaPredicted RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 DCDC5Q6ZRR9 648 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PRSS41Q7RTY9 318 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 GRINAQ7Z429 371 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 TMEM179BQ7Z7N9 219 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 HMGN2P46Q86SG4 172 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 LDLRAD3Q86YD5 345 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 IZUMO1Q8IYV9 350 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZNF808Q8N4W9 903 aaPredicted RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 PARP16Q8N5Y8 322 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 TMEM52Q8NDY8 209 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZNF555Q8NEP9 628 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR2T12Q8NG77 320 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR13D1Q8NGV5 346 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR10K1Q8NGX5 313 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ABHD4Q8TB40 342 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 GPR151Q8TDV0 419 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 LMX1AQ8TE12 382 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZFP90Q8TF47 636 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 MAL2Q969L2 176 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RPEQ96AT9 228 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PPCDCQ96CD2 204 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 MS4A6EQ96DS6 147 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZC3HAV1LQ96H79 300 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 TXNDC15Q96J42 360 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 AGAP4Q96P64 663 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR6C1Q96RD1 312 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CSF3RQ99062 836 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 NEURL2Q9BR09 285 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 GGACTQ9BVM4 153 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RSPO3Q9BXY4 272 aaPredicted RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 MROQ9BYG7 248 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ARL6Q9H0F7 186 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SRMSQ9H3Y6 488 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 REEP4Q9H6H4 257 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 TMEM27Q9HBJ8 222 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 FAM60AQ9NP50 221 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 C1orf123Q9NWV4 160 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OR14J1Q9UGF5 321 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RALYQ9UKM9 306 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 HHLA2Q9UM44 414 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 COL6A3P12111 3177 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ARHGAP21Q5T5U3 1957 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TRAV8-7A0A075B6U6 113 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 TRAV24A0A0B4J272 114 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PNMA8CA0A1B0GUJ8 204 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 A0A1B0GVT2 93 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 A0A1W2PPK0 400 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CDHR4A6H8M9 788 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RNF212BA8MTL3 300 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 PPP5D1E7EU14 171 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 F5H768 121 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 H0YGG7 62 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 H3BMQ9 156 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 UPK1AO00322 258 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 RNASET2O00584 256 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 XPNPEP2O43895 674 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 UGT2B11O75310 529 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 UGT2B17O75795 530 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 OR2J2O76002 312 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 AIFM1O95831 613 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CLIC3O95833 236 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 HLA-DQA2P01906 255 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CST2P09228 141 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CT45A8P0DMV1 189 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 CT45A9P0DMV2 189 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ETFAP13804 333 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 GPX2P18283 190 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 NELFEP18615 380 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 F2RP25116 425 aa3.11□□□□□ -1.91
SMG6-208ENST00000570874 ATP5A1P25705 553 aaKnown RBP3.11□□□□□ -1.91
SMG6-208ENST00000570874 CD38P28907 300 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms