RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 C11orf91Q3C1V1 193 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 SLC35D3Q5M8T2 416 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 RUSC1-AS1Q66K80 236 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 FIP1L1Q6UN15 594 aaKnown RBP10.89□□□□□ -0.67
SPG7-221ENST00000569720 C8orf59Q8N0T1 100 aaPredicted RBP10.89□□□□□ -0.67
SPG7-221ENST00000569720 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 OR8D4Q8NGM9 314 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 TBC1D15Q8TC07 691 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 TAF15Q92804 592 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPG7-221ENST00000569720 SLAMF6Q96DU3 332 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 WDFY2Q96P53 400 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 MBOAT4Q96T53 435 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 MYCBPQ99417 103 aaPredicted RBP10.89□□□□□ -0.67
SPG7-221ENST00000569720 KCNJ15Q99712 375 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 ANKRD60Q9BZ19 345 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 SP140LQ9H930 580 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 MARCH7Q9H992 704 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 H2AFY2Q9P0M6 372 aaPredicted RBP10.89□□□□□ -0.67
SPG7-221ENST00000569720 CTSZQ9UBR2 303 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 N6AMT1Q9Y5N5 214 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 POMT1Q9Y6A1 747 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 COMMD3-BMI1R4GMX3 469 aa10.89□□□□□ -0.67
SPG7-221ENST00000569720 CENPVL3A0A0U1RRI6 287 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 ANKRD30BLA7E2S9 258 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
SPG7-221ENST00000569720 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
SPG7-221ENST00000569720 PRODHO43272 600 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 GYPAP02724 150 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 SFTPBP07988 381 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 MELTFP08582 738 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
SPG7-221ENST00000569720 SLC15A1P46059 708 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 CXCR4P61073 352 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 ZIK1Q3SY52 487 aaPredicted RBP10.88□□□□□ -0.67
SPG7-221ENST00000569720 ZNF691Q5VV52 312 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 NXNL2Q5VZ03 156 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 THAP5Q7Z6K1 395 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 EGFL6Q8IUX8 553 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 GID4Q8IVV7 300 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 SLC37A3Q8NCC5 494 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 OR56B2PQ8NGI1 322 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 OR9Q1Q8NGQ5 310 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 OR8S1Q8NH09 359 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 RHOXF1Q8NHV9 184 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 TMEM163Q8TC26 289 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 SSMEM1Q8WWF3 244 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 CYGBQ8WWM9 190 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 TBX15Q96SF7 602 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 DDOQ99489 341 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 YTHDF1Q9BYJ9 559 aaKnown RBP10.88□□□□□ -0.67
SPG7-221ENST00000569720 ACOXLQ9NUZ1 547 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 TVP23BQ9NYZ1 205 aa10.88□□□□□ -0.67
SPG7-221ENST00000569720 IRGMA1A4Y4 181 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 ZNF593O00488 134 aaPredicted RBP10.87□□□□□ -0.67
SPG7-221ENST00000569720 DVL1O14640 695 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 TBX1O43435 398 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 NDUFA7O95182 113 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 APOC1P02654 83 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 SLC2A1P11166 492 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 MMP9P14780 707 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 MYF6P23409 242 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 HSD11B1P28845 292 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 RPL15P61313 204 aaKnown RBP10.87□□□□□ -0.67
SPG7-221ENST00000569720 ARF6P62330 175 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 GRB2P62993 217 aaKnown RBP10.87□□□□□ -0.67
SPG7-221ENST00000569720 HOXA4Q00056 320 aaPredicted RBP10.87□□□□□ -0.67
SPG7-221ENST00000569720 MED21Q13503 144 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 PCK2Q16822 640 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 TIGD6Q17RP2 521 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 TEX30Q5JUR7 227 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 OLFML2AQ68BL7 652 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 LYPD4Q6UWN0 246 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 ZNF826PQ6ZT77 177 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 BTN2A1Q7KYR7 527 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 GCSAMQ8N6F7 178 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 KIR3DL3Q8N743 410 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 ZNF511Q8NB15 262 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 SCCPDHQ8NBX0 429 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 OR4Q3Q8NH05 313 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 ZNRF4Q8WWF5 429 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 ST8SIA4Q92187 359 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 LHX4Q969G2 390 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 CHIAQ9BZP6 476 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 SMURF1Q9HCE7 757 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 CLN6Q9NWW5 311 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 HAO2Q9NYQ3 351 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 KAAG1Q9UBP8 84 aa10.87□□□□□ -0.67
SPG7-221ENST00000569720 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.87□□□□□ -0.67
SPG7-221ENST00000569720 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
SPG7-221ENST00000569720 SLC22A31A6NKX4 558 aa10.86□□□□□ -0.67
SPG7-221ENST00000569720 LHBP01229 141 aa10.86□□□□□ -0.67
SPG7-221ENST00000569720 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
SPG7-221ENST00000569720 GYPBP06028 91 aa10.86□□□□□ -0.67
SPG7-221ENST00000569720 ANXA2P07355 339 aaKnown RBP10.86□□□□□ -0.67
SPG7-221ENST00000569720 SPI1P17947 270 aa10.86□□□□□ -0.67
SPG7-221ENST00000569720 CFL1P23528 166 aaKnown RBP10.86□□□□□ -0.67
SPG7-221ENST00000569720 POLR2IP36954 125 aaKnown RBP10.86□□□□□ -0.67
SPG7-221ENST00000569720 NAA10P41227 235 aaPredicted RBP10.86□□□□□ -0.67
SPG7-221ENST00000569720 CX3CR1P49238 355 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms