RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 NSUN5P2Q63ZY6 315 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM42Q69YG0 159 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GLIPR1L1Q6UWM5 242 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 COLCA1Q6ZS62 124 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF767PQ75MW2 155 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ABHD12BQ7Z5M8 362 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 FJX1Q86VR8 437 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 WFDC8Q8IUA0 241 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SKA3Q8IX90 412 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM251Q8N6I4 163 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZFP62Q8NB50 900 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 UXS1Q8NBZ7 420 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 BEST4Q8NFU0 473 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 OR56B1Q8NGI3 324 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 OR4D10Q8NGI6 311 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 OR51S1Q8NGJ8 323 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 OR13C9Q8NGT0 318 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GRPEL2Q8TAA5 225 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF431Q8TF32 576 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CCDC107Q8WV48 283 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SPSB4Q96A44 273 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SPSB1Q96BD6 273 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF799Q96GE5 643 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 RCC1LQ96I51 464 aaKnown RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 FAM71F1Q96KD3 344 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 PRRT1Q99946 306 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GINS4Q9BRT9 223 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SOX7Q9BT81 388 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 URM1Q9BTM9 101 aaKnown RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 TM2D1Q9BX74 207 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SELENOIQ9C0D9 397 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 OR2H1Q9GZK4 316 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CHST5Q9GZS9 411 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 KCNK15Q9H427 330 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 EXO5Q9H790 373 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF703Q9H7S9 590 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CRLF2Q9HC73 371 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 GP6Q9HCN6 339 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 PLSCR3Q9NRY6 295 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 PLEK2Q9NYT0 353 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CRIM1Q9NZV1 1036 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 MGAT4CQ9UBM8 478 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF222Q9UK12 451 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 MRPS28Q9Y2Q9 187 aaKnown RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 KLF13Q9Y2Y9 288 aaPredicted RBP4.7□□□□□ -1.66
SF3B3-213ENST00000569687 SPEF1Q9Y4P9 236 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 CACNA1CQ13936 2221 aa4.7□□□□□ -1.66
SF3B3-213ENST00000569687 DMXL1Q9Y485 3027 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 A0A0A6YYD4 124 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SPAARA0A1B0GVQ0 90 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PLSCR5A0PG75 271 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 UBE2QL1A1L167 161 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM235A6NFC5 223 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 HMSDA8MTL9 139 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CDRT15L2A8MXV6 281 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 G3V3Q6 166 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SMLR1H3BR10 107 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 H3BUI4 141 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 AKR7A2O43488 359 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SSX5O60225 188 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CDC14BO60729 498 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 MRPL33O75394 65 aaKnown RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RGS11O94810 467 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SYNGR4O95473 234 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 TPOP07202 933 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 HCKP08631 526 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SLC2A1P11166 492 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 HIST1H1DP16402 221 aaKnown RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF32P17041 273 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ANXA7P20073 488 aaKnown RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ANOS1P23352 680 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 DNASE1P24855 282 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ITGA3P26006 1051 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PMELP40967 661 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RRADP55042 308 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PPIAP62937 165 aaKnown RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RPS27AP62979 156 aaKnown RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 NHLH1Q02575 133 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RNPS1Q15287 305 aaKnown RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CEACAM16Q2WEN9 425 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 LGALSLQ3ZCW2 172 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ACTBL2Q562R1 376 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 PLAC9Q5JTB6 97 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 VAX1Q5SQQ9 334 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CLVS2Q5SYC1 327 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 AWAT2Q6E213 333 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RTL6Q6ICC9 239 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 FAHD2BQ6P2I3 314 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-213ENST00000569687 IDO2Q6ZQW0 420 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 C8orf86Q6ZUL3 223 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 RNF144BQ7Z419 303 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 DPPA2Q7Z7J5 298 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 SLC25A42Q86VD7 318 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ZNF584Q8IVC4 421 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 LRRC18Q8N456 261 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 BPIFB2Q8N4F0 458 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 ZDHHC22Q8N966 263 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 CHST4Q8NCG5 386 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 TMEM104Q8NE00 496 aa4.69□□□□□ -1.66
SF3B3-213ENST00000569687 Q8NFD4 153 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms