RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 SMIM3Q9BZL3 60 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 VAX2Q9UIW0 290 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 A0A0A6YYH2 397 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 IGHV2-70DA0A0C4DH43 119 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 A6NJ64 397 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 ONECUT2O95948 504 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 POU2F2P09086 479 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 ACP5P13686 325 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 AKR1C4P17516 323 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 P2RY2P41231 377 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 CAMLGP49069 296 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 SULT1A2P50226 295 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 PIP5KL1Q5T9C9 394 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 ZNF66Q6ZN08 573 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 C17orf78Q8N4C9 275 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 OR5AR1Q8NGP9 310 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 CPT1CQ8TCG5 803 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 SLC7A13Q8TCU3 470 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 WFDC6Q9BQY6 131 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 TAAR2Q9P1P5 351 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 COX11Q9Y6N1 276 aa9.66□□□□□ -0.86
CLK3-226ENST00000569406 IGKV1-8A0A0C4DH67 115 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 ZC3H12DA2A288 527 aaKnown RBP9.65□□□□□ -0.86
CLK3-226ENST00000569406 PRR19A6NJB7 356 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 H3BSH0 61 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 FAAHO00519 579 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 OR6A2O95222 327 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 AKAIN1P0CW23 69 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 C8orf89P0DMQ9 161 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 PYCR1P32322 319 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 HINT1P49773 126 aaPredicted RBP9.65□□□□□ -0.86
CLK3-226ENST00000569406 ZNF765Q7L2R6 523 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 ZNF101Q8IZC7 436 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 SIRT6Q8N6T7 355 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 NICN1Q9BSH3 213 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 Q9N2J8 555 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 TAS2R8Q9NYW2 309 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 A0A1B0GTI1 187 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 RAB29O14966 203 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 ADH1BP00325 375 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 IGHA1P01876 353 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 OR3A2P47893 321 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 FHITP49789 147 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 PNLIPRP1P54315 467 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 HTD2P86397 168 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 TGM3Q08188 693 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 HYAL1Q12794 435 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 SYPL1Q16563 259 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 TMEM52BQ4KMG9 183 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 CST9LP1Q5W188 147 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 LEG1Q6P5S2 330 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 OR9K2Q8NGE7 335 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 OR4D5Q8NGN0 318 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 APH1AQ96BI3 265 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 NUS1Q96E22 293 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 ABHD14AQ9BUJ0 271 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 FBRSQ9HAH7 460 aa9.65□□□□□ -0.86
CLK3-226ENST00000569406 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.65□□□□□ -0.86
CLK3-226ENST00000569406 MRPS18AQ9NVS2 196 aaKnown RBP9.65□□□□□ -0.86
CLK3-226ENST00000569406 COLQQ9Y215 455 aaPredicted RBP9.65□□□□□ -0.86
CLK3-226ENST00000569406 MDC1Q14676 2089 aaKnown RBP9.65□□□□□ -0.86
CLK3-226ENST00000569406 M0QYG6 137 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 SOCS6O14544 535 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 PLPP2O43688 288 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 MRPL3P09001 348 aaKnown RBP9.65□□□□□ -0.87
CLK3-226ENST00000569406 FUT3P21217 361 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 ENDOGQ14249 297 aaKnown RBP9.65□□□□□ -0.87
CLK3-226ENST00000569406 REEP3Q6NUK4 255 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 ZNF880Q6PDB4 577 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 GNRHR2Q96P88 292 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 MS4A10Q96PG2 267 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 VAMP8Q9BV40 100 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 ADAP2Q9NPF8 381 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 ATG2BQ96BY7 2078 aa9.65□□□□□ -0.87
CLK3-226ENST00000569406 EDDM13A0A1B0GTR0 161 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 PLPP1O14494 284 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 ATXN7O15265 892 aaPredicted RBP9.64□□□□□ -0.87
CLK3-226ENST00000569406 NUDT21O43809 227 aaKnown RBP9.64□□□□□ -0.87
CLK3-226ENST00000569406 CLEC3BP05452 202 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 OR2T7P0C7T2 308 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 ZNF10P21506 573 aaPredicted RBP9.64□□□□□ -0.87
CLK3-226ENST00000569406 TMEM268Q5VZI3 342 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 STEAP1BQ6NZ63 245 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 LINC01555Q8NAE3 123 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 OR56A1Q8NGH5 318 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 TMEM186Q96B77 213 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 SEH1LQ96EE3 360 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 SLC17A9Q9BYT1 436 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 AHSPQ9NZD4 102 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 CNIH4Q9P003 139 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 ARRDC5A6NEK1 342 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 ZNF860A6NHJ4 632 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 AMY2AP04746 511 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 CCKARP32238 428 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 TLE3Q04726 772 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 EIF2B1Q14232 305 aaKnown RBP9.64□□□□□ -0.87
CLK3-226ENST00000569406 GAS6Q14393 721 aa9.64□□□□□ -0.87
CLK3-226ENST00000569406 APCDD1LQ8NCL9 501 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms