RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 BRD7Q9NPI1 651 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 KRT84Q9NSB2 600 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TVP23BQ9NYZ1 205 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ZNF319Q9P2F9 582 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 KAAG1Q9UBP8 84 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 CTSZQ9UBR2 303 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ZNF69Q9UC07 566 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 ENOPH1Q9UHY7 261 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 LRP12Q9Y561 859 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 MPC1Q9Y5U8 109 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TMEM14AQ9Y6G1 99 aa3.98□□□□□ -1.77
CLK3-219ENST00000567805 TRRAPQ9Y4A5 3859 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 TRAV40A0A0B4J280 105 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 A0A0U1RQV5 110 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF816-ZNF321PA0A0X1KG74 233 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 TMEM269A0A1B0GVZ9 245 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 CCDC182A6NF36 153 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 DNAJC9-AS1A6NH13 148 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 SLC22A31A6NKX4 558 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZAR1LA6NP61 321 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF850A8MQ14 1090 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 SRRM5B3KS81 715 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF879B4DU55 563 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 C22orf46C9J442 243 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 CLDN34H7C241 214 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 P2RY10O00398 339 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 CDIPTO14735 213 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 TMPRSS2O15393 492 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 PRKYO43930 277 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF254O75437 659 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 TOX4O94842 621 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ECDO95905 644 aaPredicted RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 IGLV3-1P01715 115 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 RNASE1P07998 156 aaKnown RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 HKR1P10072 659 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ATP6V1B1P15313 513 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 EGR1P18146 543 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ACKR3P25106 362 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 FASP25445 335 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 DCTDP32321 178 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 MAP2K3P46734 347 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 HCCSP53701 268 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ACTR3P61158 418 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 FGF12P61328 243 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 CSNK2BP67870 215 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 HOXA4Q00056 320 aaPredicted RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 ROM1Q03395 351 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 FOXL1Q12952 345 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 BAMBIQ13145 260 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 PRDX4Q13162 271 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF829Q3KNS6 432 aaPredicted RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 FAM76BQ5HYJ3 339 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZBTB37Q5TC79 503 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 GPR157Q5UAW9 335 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 C1orf146Q5VVC0 180 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 METTL11BQ5VVY1 283 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 SLX4IPQ5VYV7 408 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 KDM4DQ6B0I6 523 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 WDR82Q6UXN9 313 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF826PQ6ZT77 177 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 KRT74Q7RTS7 529 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 SLC36A1Q7Z2H8 476 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 WDR86Q86TI4 376 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZDHHC13Q8IUH4 622 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 GID4Q8IVV7 300 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 C11orf53Q8IXP5 236 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZDHHC23Q8IYP9 409 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF679Q8IYX0 411 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 BCL6BQ8N143 479 aaPredicted RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 C3orf56Q8N813 242 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 OR8B12Q8NGG6 310 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 OR10Z1Q8NGY1 313 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 FAM81AQ8TBF8 368 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 LRRC29Q8WV35 223 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 ASB17Q8WXJ9 295 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 OR5P3Q8WZ94 311 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 PIGCQ92535 297 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 DUS3LQ96G46 650 aaKnown RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 LYZL4Q96KX0 146 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 C1orf147Q96MC9 270 aaPredicted RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 ZNF48Q96MX3 618 aaPredicted RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 CNN2Q99439 309 aaKnown RBP3.97□□□□□ -1.77
CLK3-219ENST00000567805 MNTQ99583 582 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 PKP2Q99959 881 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 MROQ9BYG7 248 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 GABARAPL1Q9H0R8 117 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 DNTTIP1Q9H147 329 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 SMURF1Q9HCE7 757 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 FAM206AQ9NX38 181 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 KLHDC2Q9Y2U9 406 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 RHBDD3Q9Y3P4 386 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 AP4S1Q9Y587 144 aa3.97□□□□□ -1.77
CLK3-219ENST00000567805 IGHV3OR15-7A0A075B7D8 119 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 NKX6-3A6NJ46 265 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 OR5B21A6NL26 309 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 PSMD9O00233 223 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 DVL1O14640 695 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms