RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TMEM106BQ9NUM4 274 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 BABAM2Q9NXR7 383 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 FRRS1LQ9P0K9 344 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 RHBDD3Q9Y3P4 386 aa10.31□□□□□ -0.76
SF3B3-208ENST00000567250 IGHV4-30-2A0A087WSY4 118 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 A0A1B0GTI1 187 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 ANKRD61A6NGH8 418 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 OR5B21A6NL26 309 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 OR4C45A6NMZ5 311 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF850A8MQ14 1090 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 PPIHO43447 177 aaKnown RBP10.3□□□□□ -0.76
SF3B3-208ENST00000567250 MRPS14O60783 128 aaKnown RBP10.3□□□□□ -0.76
SF3B3-208ENST00000567250 RP2O75695 350 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 PTBP3O95758 552 aaKnown RBP10.3□□□□□ -0.76
SF3B3-208ENST00000567250 SERPINA3P01011 423 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 NRASP01111 189 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 HEXAP06865 529 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF20P17024 532 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 NR4A2P43354 598 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 BDH1Q02338 343 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 MVKQ03426 396 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 MAB21L1Q13394 359 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 RIN1Q13671 783 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 CNN3Q15417 329 aaKnown RBP10.3□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF181Q2M3W8 571 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 PLCXD3Q63HM9 321 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 KRT74Q7RTS7 529 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 PRSS48Q7RTY5 328 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 OR13C3Q8NGS6 347 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 OR14K1Q8NGZ2 314 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 TSEN15Q8WW01 171 aaKnown RBP10.3□□□□□ -0.76
SF3B3-208ENST00000567250 GATAD2BQ8WXI9 593 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 PP6455Q8WZ26 134 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 CCL17Q92583 94 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 RAB1CQ92928 201 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 DVL3Q92997 716 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-208ENST00000567250 YIPF5Q969M3 257 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 SOX7Q9BT81 388 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 REG4Q9BYZ8 158 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 CHST5Q9GZS9 411 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 CCDC90BQ9GZT6 254 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 GCM1Q9NP62 436 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 CLEC2DQ9UHP7 191 aa10.3□□□□□ -0.76
SF3B3-208ENST00000567250 TRIM64A6NGJ6 449 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 TRIM64BA6NI03 449 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 A6NLC8 198 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 VWC2LB2RUY7 222 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 LYNX1G3V0Z9 82 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 ZFPL1O95159 310 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 CD2P06729 351 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 LYNX1P0DP58 116 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 CD99P14209 185 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 FOSL1P15407 271 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 COL8A2P25067 703 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 CHN2P52757 468 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 GNG3P63215 75 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 CEACAM21Q3KPI0 293 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 KCTD8Q6ZWB6 473 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 NANOGP1Q8N7R0 232 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 Q8TCH9 128 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 RPS4Y2Q8TD47 263 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 THRSPQ92748 146 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-208ENST00000567250 C18orf12Q96KH6 178 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 COX4I2Q96KJ9 171 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 YTHDF1Q9BYJ9 559 aaKnown RBP10.29□□□□□ -0.76
SF3B3-208ENST00000567250 NEK6Q9HC98 313 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-208ENST00000567250 DHDHQ9UQ10 334 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 CR1P17927 2039 aa10.29□□□□□ -0.76
SF3B3-208ENST00000567250 E9PI62 339 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 H7C1Q1 480 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 MT-ND2P03891 347 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 OCM2P0CE71 109 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 OCMP0CE72 109 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-208ENST00000567250 USF1P22415 310 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-208ENST00000567250 GTF2A1P52655 376 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-208ENST00000567250 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-208ENST00000567250 ACSM1Q08AH1 577 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 MED22Q15528 200 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 TBCEQ15813 527 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-208ENST00000567250 YIF1BQ5BJH7 314 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 CEP78Q5JTW2 689 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 PRAMEF6Q5VXH4 476 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 TMEM42Q69YG0 159 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 MOB3CQ70IA8 216 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 MUC20Q8N307 709 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-208ENST00000567250 SVOPQ8N4V2 548 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 ZNF485Q8NCK3 441 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 OR1M1Q8NGA1 313 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 OR5A2Q8NGI9 324 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 GPR148Q8TDV2 347 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 OR5P3Q8WZ94 311 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 RNF170Q96K19 258 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 ERVK-18Q9QC07 812 aa10.28□□□□□ -0.76
SF3B3-208ENST00000567250 SLC7A11Q9UPY5 501 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms