RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 TSSK2Q96PF2 358 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 OR2M2Q96R28 347 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 OR51V1Q9H2C8 321 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 AMBNQ9NP70 447 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 CLN6Q9NWW5 311 aa7.97□□□□□ -1.13
CAPN3-216ENST00000567071 A0A1W2PRX2 142 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 CCDC182A6NF36 153 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 DCTN6O00399 190 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 PRODHO43272 600 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 CTLA4P16410 223 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 SPI1P17947 270 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 SLC2A5P22732 501 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 CENPAP49450 140 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 PLP2Q04941 152 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF91Q05481 1191 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 PHYHD1Q5SRE7 291 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 C6orf141Q5SZD1 244 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 AADACL4Q5VUY2 407 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 NXNL2Q5VZ03 156 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 OTPQ5XKR4 325 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM53Q6P2H8 277 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 LYPD4Q6UWN0 246 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF627Q7L945 461 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 SHFQ7M4L6 423 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 GID4Q8IVV7 300 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM123Q8N131 208 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 PNLDC1Q8NA58 520 aaKnown RBP7.96□□□□□ -1.14
CAPN3-216ENST00000567071 PROKR2Q8NFJ6 384 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 OR6K6Q8NGW6 343 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 OR6N1Q8NGY5 312 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 NPRL2Q8WTW4 380 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 ZNRF4Q8WWF5 429 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 Q96MT0 163 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 DDOQ99489 341 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 FOXB1Q99853 325 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 ALG12Q9BV10 488 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 NPFFR1Q9GZQ6 430 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 NUAK2Q9H093 628 aa7.96□□□□□ -1.14
CAPN3-216ENST00000567071 SRA1Q9HD15 236 aaKnown RBP7.96□□□□□ -1.14
CAPN3-216ENST00000567071 VSX1Q9NZR4 365 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-216ENST00000567071 IGKV1D-43A0A0B4J1Z2 117 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 IQCMA0A1B0GVH7 501 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 ADARB2-AS1A8MUL3 147 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM178BH3BS89 294 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 SLC16A7O60669 478 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 MRPL3P09001 348 aaKnown RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 DBTP11182 482 aaKnown RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 CCL2P13500 99 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 MMP9P14780 707 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 APLNRP35414 380 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 SLC25A1P53007 311 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 DGCR2P98153 550 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 TCTEX1D4Q5JR98 221 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 MEDAGQ5VYS4 303 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 WDR25Q64LD2 544 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 AHSA2Q719I0 299 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF584Q8IVC4 421 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 C20orf196Q8IYI0 205 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 OR6V1Q8N148 313 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 PAQR4Q8N4S7 273 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 OR2T4Q8NH00 348 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 PTP4A1Q93096 173 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 RFKQ969G6 155 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 NMD3Q96D46 503 aaKnown RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 RNFT2Q96EX2 444 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 TECTBQ96PL2 329 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 RBP7Q96R05 134 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 CDADC1Q9BWV3 514 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 MRPL13Q9BYD1 178 aaKnown RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 ULBP2Q9BZM5 246 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 NMNAT2Q9BZQ4 307 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 H2AFY2Q9P0M6 372 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 EIF3KQ9UBQ5 218 aaKnown RBP7.95□□□□□ -1.14
CAPN3-216ENST00000567071 B9D1Q9UPM9 204 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 MYRFQ9Y2G1 1151 aa7.95□□□□□ -1.14
CAPN3-216ENST00000567071 FRAS1Q86XX4 4008 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 IGLV1-36A0A0B4J1U3 117 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 A0A1W2PPL8 197 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 TVP23AA6NH52 213 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 SNTNA6NMZ2 147 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 TIMM8AO60220 97 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 KHDRBS3O75525 346 aaKnown RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 FARS2O95363 451 aaKnown RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 RPSAP08865 295 aaKnown RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 QDPRP09417 244 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 CRHBPP24387 322 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 EEF1B2P24534 225 aaKnown RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 CRABP1P29762 137 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 GSTT1P30711 240 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 HTR1FP30939 366 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 NAA10P41227 235 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 NPY4RP50391 375 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 RBM48Q5RL73 367 aaKnown RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 SLC25A30Q5SVS4 291 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 SPATA46Q5T0L3 261 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 THEM4Q5T1C6 240 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 LCN1P1Q5VSP4 162 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 DNM1P34Q6PK57 102 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 DPPA2Q7Z7J5 298 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms