RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ANXA2P2A6NMY6 339 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 CDIPTO14735 213 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 SELENOFO60613 162 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 ALOX5APP20292 161 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 PRKACGP22612 351 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 ACKR3P25106 362 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 CSNK2BP67870 215 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 POU4F2Q12837 409 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 CDONQ4KMG0 1287 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 FAHD1Q6P587 224 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 DEGS2Q6QHC5 323 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 SLC36A1Q7Z2H8 476 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 OR5P3Q8WZ94 311 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 TMIGD2Q96BF3 282 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 MICU1Q9BPX6 476 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 PAPOLGQ9BWT3 736 aaKnown RBP11.77□□□□□ -0.53
COMMD4-216ENST00000567023 DNTTIP1Q9H147 329 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 SLC25A19Q9HC21 320 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 BRD7Q9NPI1 651 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 ACOXLQ9NUZ1 547 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 KPTNQ9Y664 436 aa11.77□□□□□ -0.53
COMMD4-216ENST00000567023 IGHV3OR15-7A0A075B7D8 119 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 FCGR1AP12314 374 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 AMY2BP19961 511 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 FASP25445 335 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 TGM4P49221 684 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
COMMD4-216ENST00000567023 ARF6P62330 175 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 GFOD2Q3B7J2 385 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 RUSC1-AS1Q66K80 236 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 STUMQ69YW2 141 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 OR10Z1Q8NGY1 313 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 DNAJC9Q8WXX5 260 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 CCL13Q99616 98 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 RTL8AQ9BWD3 113 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 TEX12Q9BXU0 123 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 YIPF3Q9GZM5 350 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 KLHDC2Q9Y2U9 406 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
COMMD4-216ENST00000567023 MEGF8Q7Z7M0 2845 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 A0A0U1RQV5 110 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 A0A1B0GUS0 222 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 A0A1B0GW55 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 FAM181BA6NEQ2 426 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 ZNF850A8MQ14 1090 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 MELTFP08582 738 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L2P0CJ85 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L3P0CJ86 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L4P0CJ87 422 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L5P0CJ88 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L6P0CJ89 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L7P0CJ90 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DCTDP32321 178 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
COMMD4-216ENST00000567023 PRDX4Q13162 271 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 TMEM236Q5W0B7 351 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4L9Q6RFH8 374 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-216ENST00000567023 METAP1DQ6UB28 335 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-216ENST00000567023 BBS1Q8NFJ9 593 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 OR8B12Q8NGG6 310 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 OR5K1Q8NHB7 308 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 HPSE2Q8WWQ2 592 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 ST8SIA4Q92187 359 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 TEAD3Q99594 435 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 PKP2Q99959 881 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 GABARAPL1Q9H0R8 117 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 HAO2Q9NYQ3 351 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 DUX4Q9UBX2 424 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 LRP12Q9Y561 859 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 CMYA5Q8N3K9 4069 aa11.75□□□□□ -0.53
COMMD4-216ENST00000567023 A0A1B0GVI7 797 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 IGLV3-1P01715 115 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 MDKP21741 143 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-216ENST00000567023 DAPP51397 102 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 ELF3P78545 371 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-216ENST00000567023 ROM1Q03395 351 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 APOFQ13790 326 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 KPNB1Q14974 876 aaKnown RBP11.74□□□□□ -0.53
COMMD4-216ENST00000567023 KCTD18Q6PI47 426 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-216ENST00000567023 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 SCCPDHQ8NBX0 429 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 NPRL2Q8WTW4 380 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 SSMEM1Q8WWF3 244 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 LRTOMTQ8WZ04 291 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 PIGCQ92535 297 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 TAF15Q92804 592 aaKnown RBP eCLIP11.74□□□□□ -0.53
COMMD4-216ENST00000567023 LHX4Q969G2 390 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 SEH1LQ96EE3 360 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 RNF170Q96K19 258 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 RAB3IPQ96QF0 476 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-216ENST00000567023 CHIAQ9BZP6 476 aa11.74□□□□□ -0.53
COMMD4-216ENST00000567023 FGF23Q9GZV9 251 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms