RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ZDHHC4Q9NPG8 344 aa3.28□□□□□ -1.88
CNOT1-209ENST00000566240 CD163L1Q9NR16 1453 aa3.28□□□□□ -1.88
CNOT1-209ENST00000566240 CPSF1Q10570 1443 aaKnown RBP3.27□□□□□ -1.89
CNOT1-209ENST00000566240 NOTCH3Q9UM47 2321 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 FLT4P35916 1363 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 KIF24Q5T7B8 1368 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 PHRF1Q9P1Y6 1649 aaKnown RBP3.27□□□□□ -1.89
CNOT1-209ENST00000566240 IGLV1-50A0A075B6I6 118 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 SMIM26A0A096LP01 95 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 IGHV5-10-1A0A0J9YXX1 117 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 RFXANKO14593 260 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 LCA5LO95447 670 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 CCNOP22674 350 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 ATP5J2P56134 94 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 SLC35B1P78383 322 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 RAB43Q86YS6 212 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 NKAIN4Q8IVV8 208 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF786Q8N393 782 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 Q8N7P7 452 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 NDNFQ8TB73 568 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 CACNG8Q8WXS5 425 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 MAP1LC3CQ9BXW4 147 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 LHX9Q9NQ69 397 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 RRAGDQ9NQL2 400 aaPredicted RBP3.27□□□□□ -1.89
CNOT1-209ENST00000566240 GGA2Q9UJY4 613 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 CES1P1Q9UKY3 287 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 PIKFYVEQ9Y2I7 2098 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 OVOS2A0A0J9YW53 1432 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 OVOS2Q6IE36 1432 aa3.27□□□□□ -1.89
CNOT1-209ENST00000566240 ARHGEF10O15013 1369 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 ABCC6O95255 1503 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 ARHGAP21Q5T5U3 1957 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 A0A0B4J2E0 115 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 IGHV1-69DA0A0B4J2H0 117 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 DNASE2O00115 360 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-209ENST00000566240 NEMFO60524 1076 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 IGHV1-8P0DP01 117 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 DTYMKP23919 212 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 HTR1DP28221 377 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 HTR2CP28335 458 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 NOVP48745 357 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 MNAT1P51948 309 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 UBE2E1P51965 193 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 NDUFA8P51970 172 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 TAS2R46P59540 309 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 RPL18AQ02543 176 aaKnown RBP3.26□□□□□ -1.89
CNOT1-209ENST00000566240 TFDP3Q5H9I0 405 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 OR2T5Q6IEZ7 315 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 TMEM205Q6UW68 189 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 NDUFAF7Q7L592 441 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 PID1Q7Z2X4 250 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 LINC01551Q86U37 167 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 UBAC2Q8NBM4 344 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 OR2T29Q8NH02 315 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 OR5W2Q8NH69 310 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 FAM104AQ969W3 186 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 TMIGD2Q96BF3 282 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 CENPNQ96H22 339 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-209ENST00000566240 UBE2E2Q96LR5 201 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 HSD17B10Q99714 261 aaKnown RBP3.26□□□□□ -1.89
CNOT1-209ENST00000566240 OSBPL11Q9BXB4 747 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 SLC25A39Q9BZJ4 359 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-209ENST00000566240 PLA2G2FQ9BZM2 168 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 CHRNA10Q9GZZ6 450 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 ANKHQ9HCJ1 492 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 FBXO8Q9NRD0 319 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF223Q9UK11 482 aaPredicted RBP3.26□□□□□ -1.89
CNOT1-209ENST00000566240 HYOU1Q9Y4L1 999 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 OR51B2Q9Y5P1 312 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 RGPD1P0DJD0 1748 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 DCCP43146 1447 aa3.26□□□□□ -1.89
CNOT1-209ENST00000566240 N4BP2Q86UW6 1770 aaPredicted RBP3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PARP4Q9UKK3 1724 aaKnown RBP3.25□□□□□ -1.89
CNOT1-209ENST00000566240 ATRXP46100 2492 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 A0A1W2PP18 115 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 DFFAO00273 331 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 RAD1O60671 282 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 CTNSO60931 367 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 SPAG7O75391 227 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 TRAPPC6AO75865 159 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PAHP00439 452 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 GCGP01275 180 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 APOA1P02647 267 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF823P16415 610 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PGAM1P18669 254 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 GGT2P36268 569 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 ARL2P36404 184 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 VAMP3Q15836 100 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 SNRNP35Q16560 246 aaKnown RBP3.25□□□□□ -1.89
CNOT1-209ENST00000566240 IGFL2Q6UWQ7 119 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 TMPRSS11AQ6ZMR5 421 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 SNX20Q7Z614 316 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 ST13P4Q8IZP2 240 aaPredicted RBP3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PGAM4Q8N0Y7 254 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 DAW1Q8N136 415 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 OR10G6Q8NH81 332 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 C15orf40Q8WUR7 153 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 SRSF12Q8WXF0 261 aaKnown RBP3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PTX4Q96A99 478 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms