RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 OR5H6Q8NGV6 325 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 TECTBQ96PL2 329 aa26.23■■□□□ 1.79
CTCF-203ENST00000566078 ANKRD30BLA7E2S9 258 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 LILRA1O75019 489 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 SELEP16581 610 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 PSG7Q13046 419 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 ZNF718Q3SXZ3 478 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 C1orf100Q5SVJ3 147 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 RGS7BPQ6MZT1 257 aaPredicted RBP26.22■■□□□ 1.79
CTCF-203ENST00000566078 SSC4DQ8WTU2 575 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 SPSB1Q96BD6 273 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 HAVCR1Q96D42 359 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 UQCC2Q9BRT2 126 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 CNTD2Q9H8S5 307 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 FZR1Q9UM11 496 aa26.22■■□□□ 1.79
CTCF-203ENST00000566078 ABCD4O14678 606 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 CALCBP10092 127 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 BMP4P12644 408 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 NKX6-1P78426 367 aaPredicted RBP26.21■■□□□ 1.79
CTCF-203ENST00000566078 KRT74Q7RTS7 529 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 CDH26Q8IXH8 852 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 SAMD12Q8N8I0 201 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 GPER1Q99527 375 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 MRI1Q9BV20 369 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 NEK6Q9HC98 313 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 PRKACBP22694 351 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 GCH1P30793 250 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 TMEM255AQ5JRV8 349 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 ZDHHC23Q8IYP9 409 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 OR4D6Q8NGJ1 314 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 SLC25A28Q96A46 364 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 WDFY2Q96P53 400 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 AKIP1Q9NQ31 210 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 OR5V1Q9UGF6 321 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 SPATA2Q9UM82 520 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 SLC7A11Q9UPY5 501 aa26.21■■□□□ 1.79
CTCF-203ENST00000566078 FAM230AA0A1W2PPH8 454 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 IQCF6A8MYZ5 107 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 INHBBP09529 407 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 TNFSF8P32971 234 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 GLRXP35754 106 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 FABP6P51161 128 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 KISS1Q15726 138 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 MBNL2Q5VZF2 373 aaKnown RBP26.2■■□□□ 1.78
CTCF-203ENST00000566078 RFT1Q96AA3 541 aa26.2■■□□□ 1.78
CTCF-203ENST00000566078 SPTBN1Q01082 2364 aaKnown RBP26.19■■□□□ 1.78
CTCF-203ENST00000566078 RPS23P62266 143 aaKnown RBP26.19■■□□□ 1.78
CTCF-203ENST00000566078 ALKBH6Q3KRA9 238 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 VHLLQ6RSH7 139 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 OR51D1Q8NGF3 324 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 S100ZQ8WXG8 99 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 DVL3Q92997 716 aaPredicted RBP26.19■■□□□ 1.78
CTCF-203ENST00000566078 BORCS8Q96FH0 119 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 ESRP2Q9H6T0 727 aaKnown RBP26.19■■□□□ 1.78
CTCF-203ENST00000566078 MRPL15Q9P015 296 aaKnown RBP26.19■■□□□ 1.78
CTCF-203ENST00000566078 PURGQ9UJV8 347 aaKnown RBP26.19■■□□□ 1.78
CTCF-203ENST00000566078 ADAM30Q9UKF2 790 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 ZNF462Q96JM2 2506 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 PLCE1Q9P212 2302 aa26.19■■□□□ 1.78
CTCF-203ENST00000566078 ANKHD1Q8IWZ3 2542 aaKnown RBP26.18■■□□□ 1.78
CTCF-203ENST00000566078 TUBAL3A6NHL2 446 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 OR3A4PP47883 348 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 LHFPL2Q6ZUX7 228 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 CCDC190Q86UF4 302 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 FAM3DQ96BQ1 224 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 KCNK15Q9H427 330 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 NPDC1Q9NQX5 325 aaPredicted RBP26.18■■□□□ 1.78
CTCF-203ENST00000566078 MPC1Q9Y5U8 109 aa26.18■■□□□ 1.78
CTCF-203ENST00000566078 KITLGP21583 273 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 POU3F4P49335 361 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 CRIP3Q6Q6R5 217 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 SLC22A25Q6T423 547 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 MFSD4AQ8N468 514 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 PNLDC1Q8NA58 520 aaKnown RBP26.17■■□□□ 1.78
CTCF-203ENST00000566078 HMG20AQ9NP66 347 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 ETV7Q9Y603 341 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 FAM25AB3EWG3 89 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 FAM25CB3EWG5 89 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 FAM25GB3EWG6 89 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 TIMM8AO60220 97 aaPredicted RBP26.17■■□□□ 1.78
CTCF-203ENST00000566078 EIF4EP06730 217 aaKnown RBP26.17■■□□□ 1.78
CTCF-203ENST00000566078 ARSBP15848 533 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 CA6P23280 308 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 PEX19P40855 299 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 FUT6P51993 359 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 MTCP1P56278 107 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 RIN1Q13671 783 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 MSMPQ1L6U9 139 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 NCMAPQ5T1S8 102 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 AWAT2Q6E213 333 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 NUP37Q8NFH4 326 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 OR5D18Q8NGL1 313 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 HPSE2Q8WWQ2 592 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 CPNE2Q96FN4 548 aaPredicted RBP26.17■■□□□ 1.78
CTCF-203ENST00000566078 PLPPR2Q96GM1 343 aa26.17■■□□□ 1.78
CTCF-203ENST00000566078 MRPS28Q9Y2Q9 187 aaKnown RBP26.17■■□□□ 1.78
CTCF-203ENST00000566078 CLDN25C9JDP6 229 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 ELK1P19419 428 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 RBP2P50120 134 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 SCAND1P57086 179 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms