RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.42□□□□□ -0.74
RNF40-208ENST00000565995 OMPP47874 163 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 RPS6KA3P51812 740 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 ZNF92Q03936 586 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 AANATQ16613 207 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 MICBQ29980 383 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 SLC36A3Q495N2 470 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 OXLD1Q5BKU9 147 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 OGFRL1Q5TC84 451 aaPredicted RBP10.42□□□□□ -0.74
RNF40-208ENST00000565995 SLC36A1Q7Z2H8 476 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 MRPL21Q7Z2W9 205 aaKnown RBP10.42□□□□□ -0.74
RNF40-208ENST00000565995 FGFRL1Q8N441 504 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 DTX3Q8N9I9 347 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 GNPDA2Q8TDQ7 276 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 NRG4Q8WWG1 115 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 ST8SIA4Q92187 359 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 C12orf43Q96C57 262 aaKnown RBP10.42□□□□□ -0.74
RNF40-208ENST00000565995 AJUBAQ96IF1 538 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 FUZQ9BT04 418 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 DCTN5Q9BTE1 182 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 MEGF9Q9H1U4 602 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 C14orf119Q9NWQ9 140 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 AURKAIP1Q9NWT8 199 aaPredicted RBP10.42□□□□□ -0.74
RNF40-208ENST00000565995 FOXJ3Q9UPW0 622 aa10.42□□□□□ -0.74
RNF40-208ENST00000565995 A0A1B0GW55 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 UNC119BA6NIH7 251 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 M0R135 149 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 BHLHE40O14503 412 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 ARPC3O15145 178 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 GASTP01350 101 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 GRPP07492 148 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L2P0CJ85 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L3P0CJ86 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L4P0CJ87 422 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L5P0CJ88 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L6P0CJ89 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L7P0CJ90 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 SAA4P35542 130 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 VHLP40337 213 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 ALDH3A2P51648 485 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 EMX1Q04741 257 aaPredicted RBP10.41□□□□□ -0.74
RNF40-208ENST00000565995 PCK2Q16822 640 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 RFX4Q33E94 735 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 SNAI3Q3KNW1 292 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 WDR38Q5JTN6 314 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4L9Q6RFH8 374 aaPredicted RBP10.41□□□□□ -0.74
RNF40-208ENST00000565995 LINC00346Q8IVM7 164 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 OR2AJ1Q8NGZ0 328 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 FANK1Q8TC84 345 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DNAJC9Q8WXX5 260 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 SPSB4Q96A44 273 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 ZNF799Q96GE5 643 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 MAP6Q96JE9 813 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 NIPSNAP1Q9BPW8 284 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 OSBPL10Q9BXB5 764 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DNTTIP1Q9H147 329 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 RIBC2Q9H4K1 309 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 SRA1Q9HD15 236 aaKnown RBP10.41□□□□□ -0.74
RNF40-208ENST00000565995 C8orf4Q9NR00 106 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 SIRT7Q9NRC8 400 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 PAPOLBQ9NRJ5 636 aaKnown RBP10.41□□□□□ -0.74
RNF40-208ENST00000565995 ONECUT1Q9UBC0 465 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 DUX4Q9UBX2 424 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 KCNG2Q9UJ96 466 aa10.41□□□□□ -0.74
RNF40-208ENST00000565995 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.4□□□□□ -0.74
RNF40-208ENST00000565995 MEIOCA2RUB1 952 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 H3BN98 237 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 M0R1W7 72 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 SOX14O95416 240 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 AMY2BP19961 511 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 ANOS1P23352 680 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 GRK5P34947 590 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 DDOSTP39656 456 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 POU4F2Q12837 409 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 NCR3LG1Q68D85 454 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 ZNF770Q6IQ21 691 aaPredicted RBP10.4□□□□□ -0.74
RNF40-208ENST00000565995 FAHD1Q6P587 224 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 SMARCD3Q6STE5 483 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 DRAM2Q6UX65 266 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 IZUMO2Q6UXV1 221 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 KLHDC1Q8N7A1 406 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 PACRGLQ8N7B6 248 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 WIPF2Q8TF74 440 aaPredicted RBP10.4□□□□□ -0.74
RNF40-208ENST00000565995 SPTSSAQ969W0 71 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 CCL13Q99616 98 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 SLC29A1Q99808 456 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 SSX3Q99909 188 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 DGCR6LQ9BY27 220 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 FAM234AQ9H0X4 552 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 TLNRD1Q9H1K6 362 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 OPA3Q9H6K4 179 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 TBC1D23Q9NUY8 699 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 MRPL22Q9NWU5 206 aaKnown RBP10.4□□□□□ -0.74
RNF40-208ENST00000565995 USE1Q9NZ43 259 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 ENOPH1Q9UHY7 261 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 SIGLEC9Q9Y336 463 aa10.4□□□□□ -0.74
RNF40-208ENST00000565995 GGT3PA6NGU5 568 aa10.39□□□□□ -0.75
RNF40-208ENST00000565995 H3BUX3 64 aa10.39□□□□□ -0.75
RNF40-208ENST00000565995 NDUFB3O43676 98 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms