RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 ABHD12BQ7Z5M8 362 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 IQCF2Q8IXL9 164 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 GABRG1Q8N1C3 465 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 C9orf62Q8N4C0 152 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 PAQR4Q8N4S7 273 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 CCDC107Q8WV48 283 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 ASB13Q8WXK3 278 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 TCEAL3Q969E4 200 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 NABP1Q96AH0 204 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 OR2A7Q96R45 310 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 GINS4Q9BRT9 223 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 SOX7Q9BT81 388 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 MYOZ1Q9NP98 299 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 GPR84Q9NQS5 396 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 GHRLQ9UBU3 117 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 FLVCR1Q9Y5Y0 555 aa6.37□□□□□ -1.39
HERPUD1-209ENST00000564678 MED12Q93074 2177 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 KIAA1549Q9HCM3 1950 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 A0A087WWL8 130 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ELOA3CA0A087WX78 387 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 CCDC187A0A096LP49 1063 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 A0A1W2PRV1 198 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 MBD3L4A6NDZ8 208 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 MBD3L3A6NE82 208 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 C9orf172C9J069 976 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 RAB3DO95716 219 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ITGB2P05107 769 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 GIPP09681 153 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 VSIG8P0DPA2 414 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 KLK2P20151 261 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 C4BPBP20851 252 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 MPZP25189 248 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 AVPR2P30518 371 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ZP1P60852 638 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 RAP2BP61225 183 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ECH1Q13011 328 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 MEF2DQ14814 521 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ZMYND11Q15326 602 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 PDSS1Q5T2R2 415 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 RIPPLY2Q5TAB7 128 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 FAAP20Q6NZ36 180 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 C11orf88Q6PI97 169 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 Q6ZTK2 550 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ANGPTL5Q86XS5 388 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 OR51S1Q8NGJ8 323 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 OR13C9Q8NGT0 318 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 OR14K1Q8NGZ2 314 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 OR14L1PQ8NHC6 308 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 KCNG3Q8TAE7 436 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 PSMF1Q92530 271 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 SPSB4Q96A44 273 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ADGRG7Q96K78 797 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 GPR137Q96N19 417 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 IP6K3Q96PC2 410 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 FOXB1Q99853 325 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 RBM24Q9BX46 236 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 ULBP2Q9BZM5 246 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 B3GNT4Q9C0J1 378 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 KCNK15Q9H427 330 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 BEX1Q9HBH7 125 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 TAS2R3Q9NYW6 316 aa6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 BOKQ9UMX3 212 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-209ENST00000564678 DHRS7CA6NNS2 312 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF736B4DX44 427 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 G3V3Y1 287 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SMLR1H3BR10 107 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 CDX4O14627 284 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SMAD9O15198 467 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MTRF1O75570 445 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MPIG6BO95866 241 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 PRF1P14222 555 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ANXA7P20073 488 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 TBPP20226 339 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 THBS4P35443 961 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ALDH3B1P43353 468 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 PHYHD1Q5SRE7 291 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 B3GNTL1Q67FW5 361 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 AWAT2Q6E213 333 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 FAM57BQ71RH2 274 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 GGNQ86UU5 652 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 NAXDQ8IW45 347 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 OR5AS1Q8N127 324 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SSC4DQ8WTU2 575 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 PP6455Q8WZ26 134 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SPTSSAQ969W0 71 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 CPNE4Q96A23 557 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 PGAM5Q96HS1 289 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SPXQ9BT56 116 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SRXN1Q9BYN0 137 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 SLC2A8Q9NY64 477 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF319Q9P2F9 582 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 DOCK10Q96BY6 2186 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 IGHV3-15A0A0B4J1V0 119 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 LRRC3CA6NJW4 275 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 ZNF716A6NP11 495 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 DISC1C4P0D8 188 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 AKR7A2O43488 359 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 DHRS3O75911 302 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 RGS11O94810 467 aa6.35□□□□□ -1.39
HERPUD1-209ENST00000564678 MT-CO3P00414 261 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms