RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	MRPL15	Q9P015	296 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	PISD	Q9UG56	409 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	GPR34	Q9UPC5	381 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FARSA	Q9Y285	508 aa	Known RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SIGLEC7	Q9Y286	467 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC45A1	Q9Y2W3	748 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	NSG2	Q9Y328	171 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	NUP214	P35658	2090 aa	Predicted RBP	4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	MCM3AP	O60318	1980 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	CHD5	Q8TDI0	1954 aa		4.93	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM230A	A0A1W2PPH8	454 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582		A6NIN4	97 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582		A6NIZ1	184 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582		A6NLC8	198 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	CPSF4L	A6NMK7	179 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	FTCDNL1	E5RQL4	147 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	TP53I11	O14683	189 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF354A	O60765	605 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	STK17B	O94768	372 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	C1orf105	O95561	183 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	SFT2D2	O95562	160 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ETHE1	O95571	254 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ASGR1	P07306	291 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	GALT	P07902	379 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	CST2	P09228	141 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	MMP10	P09238	476 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	OR8G3P	P0DMU2	310 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	TLX1	P31314	330 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	BSG	P35613	385 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	PPM1A	P35813	382 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	RGR	P47804	291 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	P2RY1	P47900	373 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	CAMLG	P49069	296 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	RND2	P52198	227 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	NCBP2	P52298	156 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	TAS2R46	P59540	309 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	UBE2K	P61086	200 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	STXBP1	P61764	594 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	TBPL1	P62380	186 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ARF5	P84085	180 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZXDB	P98169	803 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	CDK3	Q00526	305 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	REEP5	Q00765	189 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	HSPB3	Q12988	150 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	INSL4	Q14641	139 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	TAF9	Q16594	264 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	KHDC3L	Q587J8	217 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ALG10B	Q5I7T1	473 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM27D1	Q5T7N8	215 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	OR4C11	Q6IEV9	310 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	OR2T2	Q6IF00	324 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	RPUSD3	Q6P087	351 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	KCTD18	Q6PI47	426 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582		Q6ZRG5	221 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582		Q7L0L9	218 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	GRINA	Q7Z429	371 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	LRRTM1	Q86UE6	522 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF676	Q8N7Q3	588 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	BBS1	Q8NFJ9	593 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	MFSD8	Q8NHS3	518 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	CD300LF	Q8TDQ1	290 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	RAB8B	Q92930	207 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	EMG1	Q92979	244 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	MCHR2	Q969V1	340 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM46B	Q96A09	425 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	TMEM106A	Q96A25	262 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	MUCL1	Q96DR8	90 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	BSCL2	Q96G97	398 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF558	Q96NG5	402 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF385A	Q96PM9	386 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	GPX7	Q96SL4	187 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	P2RX4	Q99571	388 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	DDA1	Q9BW61	102 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	HCAR1	Q9BXC0	346 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	QTRT1	Q9BXR0	403 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	WDR13	Q9H1Z4	485 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	KIAA1456	Q9P272	454 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF223	Q9UK11	482 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	LSM7	Q9UK45	103 aa	Known RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	AMDHD2	Q9Y303	409 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	HDGFL3	Q9Y3E1	203 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	WDR45	Q9Y484	360 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582	CCDC88C	Q9P219	2028 aa		4.92	□□□□□ -1.62
CHD9-210	ENST00000564582		A0A087WV62	115 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582		A0A1W2PPH5	198 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	DNAJC9-AS1	A6NH13	148 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF726	A6NNF4	738 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	GPR89A	B7ZAQ6	455 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	DCTN6	O00399	190 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	NDUFS4	O43181	175 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SEPT4	O43236	478 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BK	O60814	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CTSV	O60911	334 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	LRP3	O75074	770 aa		4.91	□□□□□ -1.62

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