RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 SMIM26A0A096LP01 95 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 DNASE2O00115 360 aaPredicted RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 RAD51BO15315 384 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 ZNF324O75467 553 aaPredicted RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 MED6O75586 246 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 CD37P11049 281 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 TCP1P17987 556 aaKnown RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 BMI1P35226 326 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 PEX19P40855 299 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 GPR1P46091 355 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 CLDN18P56856 261 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 PFN3P60673 137 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 SLC39A6Q13433 755 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 KIR2DS1Q14954 304 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 LINC00483Q53H64 154 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 AVPI1Q5T686 147 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 KHDRBS2Q5VWX1 349 aaKnown RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 WDR86Q86TI4 376 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 INO80EQ8NBZ0 244 aaPredicted RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 SYNPRQ8TBG9 265 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 RAB1CQ92928 201 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 C9orf72Q96LT7 481 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 ZNF488Q96MN9 340 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 CAMK2N2Q96S95 79 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 CDX2Q99626 313 aaPredicted RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 SLIRPQ9GZT3 109 aaKnown RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 CLSTN2Q9H4D0 955 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 HMG20AQ9NP66 347 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 ZNF355PQ9NSJ1 428 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 ZNRD1Q9P1U0 126 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 PEF1Q9UBV8 284 aaKnown RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 COMMD3-BMI1R4GMX3 469 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 TIAM2Q8IVF5 1701 aa3.77□□□□□ -1.81
SMG1-204ENST00000561940 COL4A4P53420 1690 aaPredicted RBP3.77□□□□□ -1.81
SMG1-204ENST00000561940 A0A0U1RQV1 116 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 ERI3O43414 337 aaKnown RBP3.76□□□□□ -1.81
SMG1-204ENST00000561940 IGKV3-11P04433 115 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 ADRA2AP08913 450 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 IGFBP3P17936 291 aaPredicted RBP3.76□□□□□ -1.81
SMG1-204ENST00000561940 RBM34P42696 430 aaKnown RBP3.76□□□□□ -1.81
SMG1-204ENST00000561940 SYNJ2BPP57105 145 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 TSC22D1Q15714 1073 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 UBE2SQ16763 222 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 CHRFAM7AQ494W8 412 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 TMEM31Q5JXX7 168 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 Q5W150 140 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 OR6N1Q8NGY5 312 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 COQ8AQ8NI60 647 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 UBALD1Q8TB05 177 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 PTX4Q96A99 478 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 SGTBQ96EQ0 304 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 FOPNLQ96NB1 174 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 ZNF382Q96SR6 550 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 OR52D1Q9H346 318 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 RGCCQ9H4X1 137 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 SLC38A10Q9HBR0 1119 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 CHRAC1Q9NRG0 131 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 CHD8Q9HCK8 2581 aa3.76□□□□□ -1.81
SMG1-204ENST00000561940 DICER1Q9UPY3 1922 aaKnown RBP3.76□□□□□ -1.81
SMG1-204ENST00000561940 TMEM223A0PJW6 202 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 ZNF705GA8MUZ8 300 aaPredicted RBP3.75□□□□□ -1.81
SMG1-204ENST00000561940 MAGEB4O15481 346 aaPredicted RBP3.75□□□□□ -1.81
SMG1-204ENST00000561940 ZNF207O43670 478 aaKnown RBP3.75□□□□□ -1.81
SMG1-204ENST00000561940 SLC19A2O60779 497 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 PSMC3P17980 439 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 SRMP19623 302 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 DNAJC3Q13217 504 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 ZNF684Q5T5D7 378 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 WDFY1Q8IWB7 410 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 MYOCDQ8IZQ8 938 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 LGI3Q8N145 548 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 OR10W1Q8NGF6 305 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 NAT6Q93015 286 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 FLYWCH2Q96CP2 140 aaKnown RBP3.75□□□□□ -1.81
SMG1-204ENST00000561940 LZTS2Q9BRK4 669 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 SAMD10Q9BYL1 202 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 MYOZ1Q9NP98 299 aaPredicted RBP3.75□□□□□ -1.81
SMG1-204ENST00000561940 MED4Q9NPJ6 270 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 ZC4H2Q9NQZ6 224 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 MCUBQ9NWR8 336 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 DDX19BQ9UMR2 479 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 DOT1LQ8TEK3 1739 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 TONSLQ96HA7 1378 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 UNC80Q8N2C7 3258 aa3.75□□□□□ -1.81
SMG1-204ENST00000561940 MAP2P11137 1827 aaKnown RBP3.74□□□□□ -1.81
SMG1-204ENST00000561940 MUC6Q6W4X9 2439 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 GABRR3A8MPY1 467 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 ANKRD65E5RJM6 399 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 XRCC2O43543 280 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 CDC40O60508 579 aaKnown RBP eCLIP3.74□□□□□ -1.81
SMG1-204ENST00000561940 MPDU1O75352 247 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 RHOXF2BP0C7M4 288 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 OR8U9P0C7N5 309 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 ZNF806P0C7X5 589 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 RPS12P25398 132 aaKnown RBP3.74□□□□□ -1.81
SMG1-204ENST00000561940 CD70P32970 193 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 LINC00315P59091 139 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 TAS2R46P59540 309 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms