RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CCDC54Q8NEL0 328 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 OR1M1Q8NGA1 313 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 OR51D1Q8NGF3 324 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 OR52N4Q8NGI2 321 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 OR4D6Q8NGJ1 314 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 OR6M1Q8NGM8 313 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF671Q8TAW3 534 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 C17orf50Q8WW18 174 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 RAB40AQ8WXH6 277 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 SPTSSAQ969W0 71 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 SPSB4Q96A44 273 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 FAM3DQ96BQ1 224 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 C1orf159Q96HA4 380 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 PGAM5Q96HS1 289 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 GMPPAQ96IJ6 420 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-210ENST00000561817 BOD1Q96IK1 185 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 RBM14Q96PK6 669 aaKnown RBP5.67□□□□□ -1.5
CAPN3-210ENST00000561817 NEDD4LQ96PU5 975 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 NKX3-1Q99801 234 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-210ENST00000561817 C1QTNF5Q9BXJ0 243 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 PRRG4Q9BZD6 226 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 KCNK15Q9H427 330 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 PLEKHA1Q9HB21 404 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 GLRX2Q9NS18 164 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 RHBDL2Q9NX52 303 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 FBLN5Q9UBX5 448 aa5.67□□□□□ -1.5
CAPN3-210ENST00000561817 CGGBP1Q9UFW8 167 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-210ENST00000561817 RBMX2Q9Y388 322 aaKnown RBP5.67□□□□□ -1.5
CAPN3-210ENST00000561817 OR14I1A6ND48 311 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 WIPF3A6NGB9 483 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 DHRS7CA6NNS2 312 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 AHRRA9YTQ3 701 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 MKRN2OSH3BPM6 223 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 XRCC3O43542 346 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 SULT1B1O43704 296 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CTAG2O75638 210 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 DHRS3O75911 302 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CGAP01215 116 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 HLA-HP01893 362 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CSF1P09603 554 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 GABRA1P14867 456 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CDK2P24941 298 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 ACKR3P25106 362 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 HTR2CP28335 458 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 MPGP29372 298 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 BDKRB2P30411 391 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 BTCP35070 178 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 THBS4P35443 961 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 TALDO1P37837 337 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 KIR2DL3P43628 341 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 HTR5AP47898 357 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 POU3F4P49335 361 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 BCAP31P51572 246 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 ART1P52961 327 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 TPTEP56180 551 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 DEFA1P59665 94 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 DEFA3P59666 94 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 HTD2P86397 168 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 DGCR2P98153 550 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 KLF9Q13886 244 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 TAB1Q15750 504 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 UBE2V2Q15819 145 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 GLYATL3Q5SZD4 288 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 HACD4Q5VWC8 232 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 FBXW9Q5XUX1 488 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 NSUN5P2Q63ZY6 315 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 GLT8D1Q68CQ7 371 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 TMEM42Q69YG0 159 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 RTL6Q6ICC9 239 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 SLC22A25Q6T423 547 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CHMP1BQ7LBR1 199 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 ABHD12BQ7Z5M8 362 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 ZNF584Q8IVC4 421 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 IZUMO1Q8IYV9 350 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CADM3Q8N126 398 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 PAQR4Q8N4S7 273 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 Q8NA96 180 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 OR52H1Q8NGJ2 320 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 OR5D14Q8NGL3 314 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 OR5M9Q8NGP3 310 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 OR1K1Q8NGR3 316 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 OR13C9Q8NGT0 318 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 SYNPRQ8TBG9 265 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 SMIM4Q8WVI0 70 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 PTX4Q96A99 478 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 SARAFQ96BY9 339 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 FOXRED1Q96CU9 486 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 C10orf35Q96D05 121 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 ZC3HAV1LQ96H79 300 aaKnown RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 FAM71F1Q96KD3 344 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 POM121L2Q96KW2 1035 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 CCDC140Q96MF4 163 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 GPR137Q96N19 417 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 NEURL2Q9BR09 285 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 UQCC2Q9BRT2 126 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 THAP7Q9BT49 309 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 MS4A5Q9H3V2 200 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 METTL17Q9H7H0 456 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-210ENST00000561817 TMEM138Q9NPI0 162 aa5.66□□□□□ -1.5
CAPN3-210ENST00000561817 DECR2Q9NUI1 292 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms