RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 ALDH3A2P51648 485 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 MFGE8Q08431 387 aaPredicted RBP12.89□□□□□ -0.35
CCDC113-203ENST00000561517 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 USP43Q70EL4 1123 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 FAM90A1Q86YD7 464 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 SEMA6DQ8NFY4 1073 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 OR51E1Q8TCB6 317 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 ZNF418Q8TF45 676 aaPredicted RBP12.89□□□□□ -0.35
CCDC113-203ENST00000561517 LRRC29Q8WV35 223 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
CCDC113-203ENST00000561517 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 PIGCQ92535 297 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 PPP1R14AQ96A00 147 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 EME1Q96AY2 570 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 MRI1Q9BV20 369 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 C19orf24Q9BVV8 132 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 FGF23Q9GZV9 251 aaPredicted RBP12.89□□□□□ -0.35
CCDC113-203ENST00000561517 MOB1AQ9H8S9 216 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 MRM2Q9UI43 246 aaKnown RBP12.89□□□□□ -0.35
CCDC113-203ENST00000561517 ORC6Q9Y5N6 252 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 R4GMQ9 66 aa12.89□□□□□ -0.35
CCDC113-203ENST00000561517 KIR2DS1A0A191URI9 304 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 SRRM5B3KS81 715 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 LOC110117498-PIK3R3F6TDL0 507 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.88□□□□□ -0.35
CCDC113-203ENST00000561517 VENTXO95231 258 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 OR2T7P0C7T2 308 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 MUC1P15941 1255 aaPredicted RBP12.88□□□□□ -0.35
CCDC113-203ENST00000561517 KLF17Q5JT82 389 aaPredicted RBP12.88□□□□□ -0.35
CCDC113-203ENST00000561517 SLC25A30Q5SVS4 291 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 ZNF684Q5T5D7 378 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 BTNL3Q6UXE8 466 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 SSX6Q7RTT6 188 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 ZDHHC23Q8IYP9 409 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 ELMOD2Q8IZ81 293 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 OR10Z1Q8NGY1 313 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 RFKQ969G6 155 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 RAB3IPQ96QF0 476 aaPredicted RBP12.88□□□□□ -0.35
CCDC113-203ENST00000561517 S100A14Q9HCY8 104 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 ERVK-18Q9QC07 812 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
CCDC113-203ENST00000561517 A0A1W2PQL4 384 aaPredicted RBP12.87□□□□□ -0.35
CCDC113-203ENST00000561517 CDIPTO14735 213 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 ADAM20O43506 726 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 DHRS3O75911 302 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 GYPAP02724 150 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 HILS1P60008 231 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 SNRPGP62308 76 aaKnown RBP12.87□□□□□ -0.35
CCDC113-203ENST00000561517 RIPPLY1Q0D2K3 151 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 ARMCX4Q5H9R4 360 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 Q6ZSR3 168 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 CBR4Q8N4T8 237 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 ZFAND2BQ8WV99 257 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 UBE2FQ969M7 185 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 RNF170Q96K19 258 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 FAM71F1Q96KD3 344 aaPredicted RBP12.87□□□□□ -0.35
CCDC113-203ENST00000561517 TBX5Q99593 518 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 NUDT16L1Q9BRJ7 211 aaKnown RBP12.87□□□□□ -0.35
CCDC113-203ENST00000561517 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 OR52A1Q9UKL2 312 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 SNX5Q9Y5X3 404 aa12.87□□□□□ -0.35
CCDC113-203ENST00000561517 A0A1B0GTI1 187 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 C22orf46C9J442 243 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 MTRF1O75570 445 aaKnown RBP12.86□□□□□ -0.35
CCDC113-203ENST00000561517 FCN3O75636 299 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 SULT1C4O75897 302 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 APOL3O95236 402 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 KRT8P05787 483 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 FPR2P25090 351 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 MICBQ29980 383 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 C11orf91Q3C1V1 193 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 CEACAM21Q3KPI0 293 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 ZIK1Q3SY52 487 aaPredicted RBP12.86□□□□□ -0.35
CCDC113-203ENST00000561517 BCL2L15Q5TBC7 163 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 PLEKHG7Q6ZR37 379 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 COMMD2Q86X83 199 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 PQLC1Q8N2U9 271 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 SCCPDHQ8NBX0 429 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 RPL3LQ92901 407 aaKnown RBP12.86□□□□□ -0.35
CCDC113-203ENST00000561517 UPRTQ96BW1 309 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 C12orf43Q96C57 262 aaKnown RBP12.86□□□□□ -0.35
CCDC113-203ENST00000561517 HIST1H2AAQ96QV6 131 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 SLC6A7Q99884 636 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 C9orf16Q9BUW7 83 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 SMURF1Q9HCE7 757 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 NUP50Q9UKX7 468 aa12.86□□□□□ -0.35
CCDC113-203ENST00000561517 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC113-203ENST00000561517 IGHV3OR15-7A0A075B7D8 119 aa12.85□□□□□ -0.35
CCDC113-203ENST00000561517 METTL15A6NJ78 407 aa12.85□□□□□ -0.35
CCDC113-203ENST00000561517 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
CCDC113-203ENST00000561517 FAHP16930 419 aa12.85□□□□□ -0.35
CCDC113-203ENST00000561517 GPM6AP51674 278 aa12.85□□□□□ -0.35
CCDC113-203ENST00000561517 GNG3P63215 75 aa12.85□□□□□ -0.35
CCDC113-203ENST00000561517 OCLNQ16625 522 aa12.85□□□□□ -0.35
CCDC113-203ENST00000561517 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms