RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EGR1P18146 543 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 CFPP27918 469 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 EPHA2P29317 976 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 PSMB10P40306 273 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 CXCR4P61073 352 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 WDR25Q64LD2 544 aaPredicted RBP13.29□□□□□ -0.28
LMX1B-204ENST00000561065 PLEKHG7Q6ZR37 379 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 DOK3Q7L591 496 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 COMMD2Q86X83 199 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 OR8B3Q8NGG8 313 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 HRASLS5Q96KN8 279 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 DUX5Q96PT3 197 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 OR8B2Q96RD0 313 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 JMJD8Q96S16 334 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 RTL8AQ9BWD3 113 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 PAPOLGQ9BWT3 736 aaKnown RBP13.29□□□□□ -0.28
LMX1B-204ENST00000561065 SMURF1Q9HCE7 757 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 KLHDC2Q9Y2U9 406 aa13.29□□□□□ -0.28
LMX1B-204ENST00000561065 TRAV40A0A0B4J280 105 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 CCDC182A6NF36 153 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 DNAJC9-AS1A6NH13 148 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 TMEM210A6NLX4 147 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 LOC110117498-PIK3R3F6TDL0 507 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 H3BNX3 289 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 EI24O14681 340 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 HCCSP53701 268 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 RIPPLY1Q0D2K3 151 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 OR8B8Q15620 311 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 SLC25A30Q5SVS4 291 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 ZBTB37Q5TC79 503 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 SFRP4Q6FHJ7 346 aaPredicted RBP13.28□□□□□ -0.28
LMX1B-204ENST00000561065 KCTD20Q7Z5Y7 419 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 PQLC1Q8N2U9 271 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 GALNT4Q8N4A0 578 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 CBR4Q8N4T8 237 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 GCSAMQ8N6F7 178 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 CCDC54Q8NEL0 328 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 OR51G2Q8NGK0 314 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 RAB40AQ8WXH6 277 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 UPRTQ96BW1 309 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 ADI1Q9BV57 179 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 RNPEPL1Q9HAU8 725 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 C8orf4Q9NR00 106 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 SNX5Q9Y5X3 404 aa13.28□□□□□ -0.28
LMX1B-204ENST00000561065 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.28
LMX1B-204ENST00000561065 hCG_1807616A0A1W2PRN6 198 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 C3orf80F5H4A9 247 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 LGALS8O00214 317 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 TNFRSF13BO14836 293 aaPredicted RBP13.27□□□□□ -0.29
LMX1B-204ENST00000561065 SULT1C4O75897 302 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 PLATP00750 562 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 CST4P01036 141 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 FPR2P25090 351 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 NPY4RP50391 375 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 SNRPGP62308 76 aaKnown RBP13.27□□□□□ -0.29
LMX1B-204ENST00000561065 ACTC1P68032 377 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 ACTA1P68133 377 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 CD276Q5ZPR3 534 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 BTNL3Q6UXE8 466 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 BOLLQ8N9W6 283 aaKnown RBP13.27□□□□□ -0.29
LMX1B-204ENST00000561065 NUDT16L1Q9BRJ7 211 aaKnown RBP13.27□□□□□ -0.29
LMX1B-204ENST00000561065 PBOV1Q9GZY1 135 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 ADGRL4Q9HBW9 690 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 C1orf123Q9NWV4 160 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.27□□□□□ -0.29
LMX1B-204ENST00000561065 ERVK-18Q9QC07 812 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 CLN8Q9UBY8 286 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 GTF2A1LQ9UNN4 478 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 GMPPBQ9Y5P6 360 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 CMYA5Q8N3K9 4069 aa13.27□□□□□ -0.29
LMX1B-204ENST00000561065 ZNF816-ZNF321PA0A0X1KG74 233 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 KIR2DS1A0A191URI9 304 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 MDFIC2A0A1B0GVS7 189 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 RPSAP08865 295 aaKnown RBP13.26□□□□□ -0.29
LMX1B-204ENST00000561065 PPIAL4GP0DN37 164 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 POLR2IP36954 125 aaKnown RBP13.26□□□□□ -0.29
LMX1B-204ENST00000561065 MTNR1AP48039 350 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 CSNK2BP67870 215 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 ELF3P78545 371 aaPredicted RBP13.26□□□□□ -0.29
LMX1B-204ENST00000561065 MICBQ29980 383 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 C11orf91Q3C1V1 193 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 BCL2L15Q5TBC7 163 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 FAM220AQ7Z4H9 259 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 FAM90A1Q86YD7 464 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 EGFL6Q8IUX8 553 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 C11orf53Q8IXP5 236 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 ZDHHC23Q8IYP9 409 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 YIPF7Q8N8F6 280 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 ZNF555Q8NEP9 628 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 OR8B12Q8NGG6 310 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 PIGCQ92535 297 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 GCDHQ92947 438 aaPredicted RBP13.26□□□□□ -0.29
LMX1B-204ENST00000561065 RDH12Q96NR8 316 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 NUFIP1Q9UHK0 495 aaKnown RBP13.26□□□□□ -0.29
LMX1B-204ENST00000561065 ENPP5Q9UJA9 477 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 RHBDD3Q9Y3P4 386 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 R4GMQ9 66 aa13.26□□□□□ -0.29
LMX1B-204ENST00000561065 A0A1B0GW55 424 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 OOEPA6NGQ2 149 aa13.25□□□□□ -0.29
LMX1B-204ENST00000561065 METTL15A6NJ78 407 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms