RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 RNF138Q8WVD3 245 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TSEN15Q8WW01 171 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 PATE1Q8WXA2 126 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 AQP3Q92482 292 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 RIT1Q92963 219 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TAAR8Q969N4 342 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MARC2Q969Z3 335 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TSACCQ96A04 125 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 MRGPRFQ96AM1 343 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF524Q96C55 264 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SEH1LQ96EE3 360 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 KTI12Q96EK9 354 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 MRGPRX1Q96LB2 322 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CDCA3Q99618 268 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 NPAS1Q99742 590 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PRRT1Q99946 306 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 KLHDC3Q9BQ90 382 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 KXD1Q9BQD3 176 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CCDC3Q9BQI4 270 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PIMREGQ9BSJ6 248 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 NUDT9Q9BW91 350 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF416Q9BWM5 594 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 GPR174Q9BXC1 333 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 NKX6-2Q9C056 277 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 LAT2Q9GZY6 243 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 NXF5Q9H1B4 397 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 S1PR5Q9H228 398 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SYT4Q9H2B2 425 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TXNIPQ9H3M7 391 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PIGMQ9H3S5 423 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 EXO5Q9H790 373 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 C8orf33Q9H7E9 229 aaPredicted RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 UCK1Q9HA47 277 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 FAM60AQ9NP50 221 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 FANCFQ9NPI8 374 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 IFT46Q9NQC8 304 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 G6PC2Q9NQR9 355 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PRTFDC1Q9NRG1 225 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 UBQLN4Q9NRR5 601 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 TMEM100Q9NV29 134 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MRPL22Q9NWU5 206 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 TAS2R4Q9NYW5 299 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 CPNE7Q9UBL6 633 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PISDQ9UG56 409 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 NDRG3Q9UGV2 375 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PURGQ9UJV8 347 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 FBXL2Q9UKC9 423 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MRTO4Q9UKD2 239 aaKnown RBP2.16□□□□□ -2.06
SPG11-223ENST00000560858 IKZF2Q9UKS7 526 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 PLCL2Q9UPR0 1127 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 DHDHQ9UQ10 334 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 SLC22A13Q9Y226 551 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 ZNF175Q9Y473 711 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 MMACHCQ9Y4U1 282 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 R4GMQ9 66 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 BRCA2P51587 3418 aa2.16□□□□□ -2.06
SPG11-223ENST00000560858 F5P12259 2224 aa2.15□□□□□ -2.06
SPG11-223ENST00000560858 ALPK2Q86TB3 2170 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 A0A0A6YYC8 382 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 A0A0B4J2A0 478 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SPTY2D1-AS1A0A0U1RR47 76 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 A0A1W2PNV4 684 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 KANTRA0A1W2PQU2 76 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 C9orf170A2RU37 121 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MEIS3P1A6NDR6 274 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMEM235A6NFC5 223 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TLCD2A6NGC4 264 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR5H14A6NHG9 310 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR6C76A6NM76 312 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 OR2AT4A6NND4 320 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TMEM14DPA8MWL7 114 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ZNF736B4DX44 427 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 DISC1C4P0D8 188 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 FTCDNL1E5RQL4 147 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 H3BMH7 237 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TEX46H3BTG2 121 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 I3L1I5 382 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 RAB27BO00194 218 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 LGALS8O00214 317 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CLDN4O14493 209 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 RRHO14718 337 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ICOSLGO75144 302 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 MTRF1O75570 445 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 SLC25A12O75746 678 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 STK17BO94768 372 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ATG12O94817 140 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 KLF8O95600 359 aaPredicted RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 DUS4LO95620 317 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 DDAH2O95865 285 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 ACTL6AO96019 429 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CYB5AP00167 134 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TNFP01375 233 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 HLA-AP01891 365 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 IGHV4-34P06331 123 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CD2P06729 351 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 CRHP06850 196 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 HEXAP06865 529 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 SP1P08047 785 aa2.15□□□□□ -2.07
SPG11-223ENST00000560858 TPT1P13693 172 aaKnown RBP2.15□□□□□ -2.07
SPG11-223ENST00000560858 CTLA4P16410 223 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms