RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 WDR38Q5JTN6 314 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 KRT74Q7RTS7 529 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 OR10Z1Q8NGY1 313 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 PIGCQ92535 297 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 ITFG2Q969R8 447 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 C12orf43Q96C57 262 aaKnown RBP16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 WDFY2Q96P53 400 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 CCL13Q99616 98 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 PKP2Q99959 881 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 MROQ9BYG7 248 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 SIRPDQ9H106 197 aa16.93■□□□□ 0.3
CHRNA3-207ENST00000559941 A0A0U1RQV5 110 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 MDFIC2A0A1B0GVS7 189 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 PRKYO43930 277 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 MRPL3P09001 348 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 ELF3P78545 371 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 ROM1Q03395 351 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 ATP6AP1Q15904 470 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 METTL11BQ5VVY1 283 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 SLC36A1Q7Z2H8 476 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 ST8SIA4Q92187 359 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 RPL3LQ92901 407 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 SEH1LQ96EE3 360 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 RNF170Q96K19 258 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 OR8B4Q96RC9 309 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 ZNF747Q9BV97 191 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 PRRG3Q9BZD7 231 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 FGF23Q9GZV9 251 aaPredicted RBP16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 FAM206AQ9NX38 181 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 RPUSD1Q9UJJ7 312 aaKnown RBP16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 TMEM14AQ9Y6G1 99 aa16.92■□□□□ 0.3
CHRNA3-207ENST00000559941 CENPVL3A0A0U1RRI6 287 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 TMEM269A0A1B0GVZ9 245 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 A0A1B0GW55 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 PSMD9O00233 223 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 MITFO75030 526 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ZNF254O75437 659 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L2P0CJ85 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L3P0CJ86 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L4P0CJ87 422 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L5P0CJ88 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L6P0CJ89 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L7P0CJ90 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 MAP2K3P46734 347 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 RASSF2P50749 326 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ARF6P62330 175 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 EFNB1P98172 346 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 PDCD1Q15116 288 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ATPAF1Q5TC12 328 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4L9Q6RFH8 374 aaPredicted RBP16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ZDHHC23Q8IYP9 409 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ZNF679Q8IYX0 411 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 SCCPDHQ8NBX0 429 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 HPSE2Q8WWQ2 592 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ASB17Q8WXJ9 295 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ZDHHC16Q969W1 377 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 HIST1H2AAQ96QV6 131 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 CNTD2Q9H8S5 307 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 NOX4Q9NPH5 578 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 KRT84Q9NSB2 600 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 HAO2Q9NYQ3 351 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 DUX4Q9UBX2 424 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 COPS3Q9UNS2 423 aa16.91■□□□□ 0.3
CHRNA3-207ENST00000559941 ZNF816-ZNF321PA0A0X1KG74 233 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 PRR32B1ATL7 298 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 G3V2T6 193 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 HOXA3O43365 443 aaPredicted RBP16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 ATP6V1B1P15313 513 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 AMY2BP19961 511 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 TGM4P49221 684 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 SLX4IPQ5VYV7 408 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 RUSC1-AS1Q66K80 236 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 STUMQ69YW2 141 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 C16orf87Q6PH81 154 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 KCTD8Q6ZWB6 473 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 MEPCEQ7L2J0 689 aaKnown RBP16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 FGFRL1Q8N441 504 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 FAM216BQ8N7L0 139 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 LY6G5BQ8NDX9 201 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 SGMS2Q8NHU3 365 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 FAM81AQ8TBF8 368 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 DMRTB1Q96MA1 342 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 RAB3IPQ96QF0 476 aaPredicted RBP16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 CNN2Q99439 309 aaKnown RBP16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 DNTTIP1Q9H147 329 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 PCDHGB1Q9Y5G3 927 aa16.9■□□□□ 0.3
CHRNA3-207ENST00000559941 ZAR1LA6NP61 321 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 GPR37O15354 613 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 NDUFB3O43676 98 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 ATP5HO75947 161 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 IGLV3-1P01715 115 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 FASP25445 335 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 EPHA2P29317 976 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 RIDAP52758 137 aaKnown RBP16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 AADACL4Q5VUY2 407 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 NXNL2Q5VZ03 156 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 KDM4DQ6B0I6 523 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 Q6YL49 198 aa16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 BCDIN3DQ7Z5W3 292 aaKnown RBP16.89■□□□□ 0.29
CHRNA3-207ENST00000559941 TCEANCQ8N8B7 351 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms