RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PSMB1P20618 241 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 HLA-DMAP28067 261 aa2.53□□□□□ -2
SPG11-218ENST00000559754 PSMB5P28074 263 aa2.53□□□□□ -2
SPG11-218ENST00000559754 HTR1DP28221 377 aa2.53□□□□□ -2
SPG11-218ENST00000559754 GTF2H1P32780 548 aa2.53□□□□□ -2
SPG11-218ENST00000559754 TGM4P49221 684 aa2.53□□□□□ -2
SPG11-218ENST00000559754 P2RX1P51575 399 aa2.53□□□□□ -2
SPG11-218ENST00000559754 NCBP2P52298 156 aaKnown RBP eCLIP2.53□□□□□ -2
SPG11-218ENST00000559754 OR10A3P58181 314 aa2.53□□□□□ -2
SPG11-218ENST00000559754 RPS23P62266 143 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 BNIP2Q12982 314 aa2.53□□□□□ -2
SPG11-218ENST00000559754 KIAA0040Q15053 153 aa2.53□□□□□ -2
SPG11-218ENST00000559754 OR1Q1Q15612 314 aa2.53□□□□□ -2
SPG11-218ENST00000559754 TRAM1Q15629 374 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ZNF630Q2M218 657 aaPredicted RBP2.53□□□□□ -2
SPG11-218ENST00000559754 GOLGA7BQ2TAP0 167 aa2.53□□□□□ -2
SPG11-218ENST00000559754 PIGGQ5H8A4 983 aa2.53□□□□□ -2
SPG11-218ENST00000559754 SYT6Q5T7P8 510 aaPredicted RBP2.53□□□□□ -2
SPG11-218ENST00000559754 KHDRBS2Q5VWX1 349 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 NIPAL1Q6NVV3 410 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ZNF493Q6ZR52 646 aa2.53□□□□□ -2
SPG11-218ENST00000559754 TMEM179BQ7Z7N9 219 aa2.53□□□□□ -2
SPG11-218ENST00000559754 SLC7A5P1Q8MH63 180 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ATPAF2Q8N5M1 289 aa2.53□□□□□ -2
SPG11-218ENST00000559754 TMEM156Q8N614 296 aa2.53□□□□□ -2
SPG11-218ENST00000559754 METTL13Q8N6R0 699 aa2.53□□□□□ -2
SPG11-218ENST00000559754 UBAC2Q8NBM4 344 aa2.53□□□□□ -2
SPG11-218ENST00000559754 OR8G5Q8NG78 346 aa2.53□□□□□ -2
SPG11-218ENST00000559754 OR2L5Q8NG80 312 aa2.53□□□□□ -2
SPG11-218ENST00000559754 OR51Q1Q8NH59 317 aa2.53□□□□□ -2
SPG11-218ENST00000559754 NEIL3Q8TAT5 605 aa2.53□□□□□ -2
SPG11-218ENST00000559754 DYNC2LI1Q8TCX1 351 aa2.53□□□□□ -2
SPG11-218ENST00000559754 LRRC29Q8WV35 223 aa2.53□□□□□ -2
SPG11-218ENST00000559754 IL22RA2Q969J5 263 aa2.53□□□□□ -2
SPG11-218ENST00000559754 PPWD1Q96BP3 646 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 FLYWCH2Q96CP2 140 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 HAUS1Q96CS2 278 aa2.53□□□□□ -2
SPG11-218ENST00000559754 LRRC58Q96CX6 371 aa2.53□□□□□ -2
SPG11-218ENST00000559754 FAM19A4Q96LR4 140 aa2.53□□□□□ -2
SPG11-218ENST00000559754 MAGEB18Q96M61 343 aa2.53□□□□□ -2
SPG11-218ENST00000559754 ZNF488Q96MN9 340 aa2.53□□□□□ -2
SPG11-218ENST00000559754 APOL4Q9BPW4 351 aa2.53□□□□□ -2
SPG11-218ENST00000559754 C20orf144Q9BQM9 153 aa2.53□□□□□ -2
SPG11-218ENST00000559754 SLIRPQ9GZT3 109 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 PARP12Q9H0J9 701 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 LINC00597Q9H2U6 94 aa2.53□□□□□ -2
SPG11-218ENST00000559754 FAM49BQ9NUQ9 324 aa2.53□□□□□ -2
SPG11-218ENST00000559754 PLEKHJ1Q9NW61 149 aa2.53□□□□□ -2
SPG11-218ENST00000559754 TRMT112Q9UI30 125 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 SIGLEC9Q9Y336 463 aa2.53□□□□□ -2
SPG11-218ENST00000559754 F11RQ9Y624 299 aaKnown RBP2.53□□□□□ -2
SPG11-218ENST00000559754 VWA8A3KMH1 1905 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 PCDH11XQ9BZA7 1347 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 SIGLEC1Q9BZZ2 1709 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 SMIM23A6NLE4 172 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 C9J4A7 227 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 FTCDNL1E5RQL4 147 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 RAD1O60671 282 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 MPZL1O95297 269 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 DEXIO95424 95 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 RAB36O95755 333 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 HLA-AP01891 365 aaKnown RBP2.52□□□□□ -2.01
SPG11-218ENST00000559754 BGLAPP02818 100 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 HSPB1P04792 205 aaKnown RBP2.52□□□□□ -2.01
SPG11-218ENST00000559754 LIMS3P0CW19 117 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 LIMS4P0CW20 117 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 GABRR1P24046 479 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 CEACAM6P40199 344 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 CDKN2BP42772 138 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 ZNF138P52744 262 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 STC1P52823 247 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 AQP5P55064 265 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 RAB38P57729 211 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 MTPNP58546 118 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 TAS2R31P59538 309 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 HERVK_113P61574 105 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 RHOAP61586 193 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 TRIP13Q15645 432 aaPredicted RBP2.52□□□□□ -2.01
SPG11-218ENST00000559754 GUCA2BQ16661 112 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 RFX4Q33E94 735 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 TTLL9Q3SXZ7 439 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 TFDP3Q5H9I0 405 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 OR10J3Q5JRS4 329 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 SAPCD1Q5SSQ6 148 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 STRADAQ7RTN6 431 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 KRT222Q8N1A0 295 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 CCDC54Q8NEL0 328 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 OR5T1Q8NG75 326 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 OR11H7Q8NGC8 314 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 NT5CQ8TCD5 201 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 PIFOQ8TCI5 191 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 RNF133Q8WVZ7 376 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 FAM151AQ8WW52 585 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 NTAN1Q96AB6 310 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 DCPSQ96C86 337 aaKnown RBP2.52□□□□□ -2.01
SPG11-218ENST00000559754 RPUSD4Q96CM3 377 aaKnown RBP2.52□□□□□ -2.01
SPG11-218ENST00000559754 RBBP8Q99708 897 aa2.52□□□□□ -2.01
SPG11-218ENST00000559754 NXF2Q9GZY0 626 aaKnown RBP2.52□□□□□ -2.01
SPG11-218ENST00000559754 CLMPQ9H6B4 373 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms