RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TMEM210A6NLX4 147 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 C22orf46C9J442 243 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 ZNF670-ZNF695F2Z2N8 137 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.11□□□□□ -0.95
SPG11-216ENST00000559347 EBAG9O00559 213 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 TNFRSF13BO14836 293 aaPredicted RBP9.11□□□□□ -0.95
SPG11-216ENST00000559347 TTRP02766 147 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 HTR1FP30939 366 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 MAP2K3P46734 347 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 NPY4RP50391 375 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 ALDH3A2P51648 485 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 CDC42P60953 191 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 PAX8Q06710 450 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 EGR3Q06889 387 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 POU4F2Q12837 409 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 PLEKHG7Q6ZR37 379 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 USP43Q70EL4 1123 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 KRT74Q7RTS7 529 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 COMMD2Q86X83 199 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 ZDHHC23Q8IYP9 409 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 GALNT4Q8N4A0 578 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 FAM81AQ8TBF8 368 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 OR51E1Q8TCB6 317 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 LRRC29Q8WV35 223 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 RAB40AQ8WXH6 277 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 OR5P3Q8WZ94 311 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 TECTBQ96PL2 329 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 MICU1Q9BPX6 476 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 SMURF1Q9HCE7 757 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 GPR84Q9NQS5 396 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 MRM2Q9UI43 246 aaKnown RBP9.11□□□□□ -0.95
SPG11-216ENST00000559347 IGHV3OR15-7A0A075B7D8 119 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 TRAV40A0A0B4J280 105 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 SRRM5B3KS81 715 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 E9PQ18 207 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 LOC110117498-PIK3R3F6TDL0 507 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 CDIPTO14735 213 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 MAGEB4O15481 346 aaPredicted RBP9.1□□□□□ -0.95
SPG11-216ENST00000559347 ADAM20O43506 726 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 FCN3O75636 299 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 APOL3O95236 402 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 GYPAP02724 150 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 ATP6V1B1P15313 513 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 CFHR2P36980 270 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 BCL2L15Q5TBC7 163 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 BTNL3Q6UXE8 466 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 BPIFB2Q8N4F0 458 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
SPG11-216ENST00000559347 ZFAND2BQ8WV99 257 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 C22orf15Q8WYQ4 148 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 PIGCQ92535 297 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 ITFG2Q969R8 447 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 PPP1R14AQ96A00 147 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 EME1Q96AY2 570 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 UPRTQ96BW1 309 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 FAM71F1Q96KD3 344 aaPredicted RBP9.1□□□□□ -0.95
SPG11-216ENST00000559347 HRASLS5Q96KN8 279 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 TBX5Q99593 518 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 APOL4Q9BPW4 351 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 NUDT16L1Q9BRJ7 211 aaKnown RBP9.1□□□□□ -0.95
SPG11-216ENST00000559347 SUCNR1Q9BXA5 334 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 KAAG1Q9UBP8 84 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 NUP50Q9UKX7 468 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 GTF2A1LQ9UNN4 478 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 ORC6Q9Y5N6 252 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 R4GMQ9 66 aa9.1□□□□□ -0.95
SPG11-216ENST00000559347 KIR2DS1A0A191URI9 304 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 A0A1B0GW55 424 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 A0A1W2PQL4 384 aaPredicted RBP9.09□□□□□ -0.95
SPG11-216ENST00000559347 NDUFA2O43678 99 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 ENSAO43768 121 aaKnown RBP9.09□□□□□ -0.95
SPG11-216ENST00000559347 DHRS3O75911 302 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 KRT8P05787 483 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L2P0CJ85 424 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L3P0CJ86 424 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L4P0CJ87 422 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L5P0CJ88 424 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L6P0CJ89 424 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L7P0CJ90 424 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 MUC1P15941 1255 aaPredicted RBP9.09□□□□□ -0.95
SPG11-216ENST00000559347 FAHP16930 419 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 GPM6AP51674 278 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
SPG11-216ENST00000559347 TMED1Q13445 227 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 FAM76BQ5HYJ3 339 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 WDR38Q5JTN6 314 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 CEP78Q5JTW2 689 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 ZNF684Q5T5D7 378 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 ZBTB37Q5TC79 503 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 STUMQ69YW2 141 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 DUX4L9Q6RFH8 374 aaPredicted RBP9.09□□□□□ -0.95
SPG11-216ENST00000559347 ELMOD2Q8IZ81 293 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 CBR4Q8N4T8 237 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 SCCPDHQ8NBX0 429 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 OR10Z1Q8NGY1 313 aa9.09□□□□□ -0.95
SPG11-216ENST00000559347 RPL3LQ92901 407 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms