RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ATP6V1G2O95670 118 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 CCL1P22362 96 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 ETV1P50549 477 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 IL18R1Q13478 541 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 ZNF181Q2M3W8 571 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 Q6ZSR3 168 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 PEG10Q86TG7 708 aaKnown RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 LRRC28Q86X40 367 aaPredicted RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 KLBQ86Z14 1044 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 ZDHHC23Q8IYP9 409 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 C8orf59Q8N0T1 100 aaPredicted RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 GCSAMQ8N6F7 178 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 SETD9Q8NE22 299 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 RPL3LQ92901 407 aaKnown RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 SEH1LQ96EE3 360 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 FN3KRPQ9HA64 309 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 TMEM165Q9HC07 324 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 FGF20Q9NP95 211 aaPredicted RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 GPR173Q9NS66 373 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 NOP16Q9Y3C1 178 aaKnown RBP15.68■□□□□ 0.1
CASC4-209ENST00000559222 PCDHGB1Q9Y5G3 927 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 MPC1Q9Y5U8 109 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 HIVEP2P31629 2446 aa15.68■□□□□ 0.1
CASC4-209ENST00000559222 LOC107986453A0A1B0GWG9 222 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 CEACAM18A8MTB9 384 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 FADS2O95864 444 aaKnown RBP15.67■□□□□ 0.1
CASC4-209ENST00000559222 DOC2BQ14184 412 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 SFRP4Q6FHJ7 346 aaPredicted RBP15.67■□□□□ 0.1
CASC4-209ENST00000559222 FAM166AQ6J272 317 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 LYPD2Q6UXB3 125 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 MOB3CQ70IA8 216 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 KRT74Q7RTS7 529 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 SPERTQ8NA61 448 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 DEFB108BQ8NET1 73 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 TMEM246Q9BRR3 403 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 VCXQ9H320 206 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 C14orf119Q9NWQ9 140 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 RNF7Q9UBF6 113 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 CLEC2DQ9UHP7 191 aa15.67■□□□□ 0.1
CASC4-209ENST00000559222 NIPBLQ6KC79 2804 aaeCLIP15.67■□□□□ 0.17e-6■□□□□ 10.5
CASC4-209ENST00000559222 IGHV3OR15-7A0A075B7D8 119 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 hCG_1807616A0A1W2PRN6 198 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 F5H0A9 414 aaPredicted RBP15.66■□□□□ 0.1
CASC4-209ENST00000559222 ZFP36P26651 326 aaKnown RBP15.66■□□□□ 0.1
CASC4-209ENST00000559222 MDH2P40926 338 aaKnown RBP15.66■□□□□ 0.1
CASC4-209ENST00000559222 GPM6AP51674 278 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 RIPPLY1Q0D2K3 151 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 TMEM155Q4W5P6 130 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 KLHL22Q53GT1 634 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 OR2G6Q5TZ20 316 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 TMEM42Q69YG0 159 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 XAF1Q6GPH4 301 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 FDX2Q6P4F2 183 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 WDR82Q6UXN9 313 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 KCTD8Q6ZWB6 473 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 DOK3Q7L591 496 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 THAP5Q7Z6K1 395 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 OR11L1Q8NGX0 322 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 GGHQ92820 318 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 ERGIC1Q969X5 290 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 RNF170Q96K19 258 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 MICU1Q9BPX6 476 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 RTL8AQ9BWD3 113 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 TLNRD1Q9H1K6 362 aa15.66■□□□□ 0.1
CASC4-209ENST00000559222 PATZ1Q9HBE1 687 aaKnown RBP15.66■□□□□ 0.1
CASC4-209ENST00000559222 PPIAL4EA0A075B759 164 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 A0A1B0GVI7 797 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 LRRC30A6NM36 301 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ANXA2P2A6NMY6 339 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 OR4C45A6NMZ5 311 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ZNF732B4DXR9 585 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 PPIAL4DF5H284 164 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.65■□□□□ 0.1
CASC4-209ENST00000559222 IFNL4K9M1U5 179 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 CDIPTO14735 213 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 SYT7O43581 403 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 PLPP2O43688 288 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 MSMBP08118 114 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 HTR1AP08908 422 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 PPIAL4FP0DN26 164 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 IRF2P14316 349 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ATP6V1B1P15313 513 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 GTF2A1P52655 376 aaPredicted RBP15.65■□□□□ 0.1
CASC4-209ENST00000559222 ACTA2P62736 377 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ACTG2P63267 376 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 LCN2P80188 198 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ZNF404Q494X3 552 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 PLCXD3Q63HM9 321 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 FTMTQ8N4E7 242 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 OR51A4Q8NGJ6 313 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 LRRC29Q8WV35 223 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 RAB39BQ96DA2 213 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 JAM3Q9BX67 310 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 ENPP5Q9UJA9 477 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 KCNS2Q9ULS6 477 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 PPIAL4AQ9Y536 164 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 HSPE1-MOB4S4R3N1 261 aa15.65■□□□□ 0.1
CASC4-209ENST00000559222 B4DSR2 109 aa15.64■□□□□ 0.09
CASC4-209ENST00000559222 FCN3O75636 299 aa15.64■□□□□ 0.09
CASC4-209ENST00000559222 RHBDL1O75783 438 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms