RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 IL5RAQ01344 420 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 LRRC10Q5BKY1 277 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 CMTM4Q8IZR5 234 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 ARHGAP24Q8N264 748 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 FTMTQ8N4E7 242 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 FAM81AQ8TBF8 368 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 RNF170Q96K19 258 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 WDR13Q9H1Z4 485 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 PRDM13Q9H4Q3 707 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 ZNF391Q9UJN7 358 aa12.82□□□□□ -0.36
TPM1-211ENST00000558314 A0A1B0GUS0 222 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 PSMD9O00233 223 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 AKR7A2O43488 359 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 TIPRLO75663 272 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 NDUFB7P17568 137 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 CALB2P22676 271 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 GABRA2P47869 451 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 HCCSP53701 268 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 KLRD1Q13241 179 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 CDONQ4KMG0 1287 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 MIDNQ504T8 468 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 DMRTC1Q5HYR2 192 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 PRSS45Q7RTY3 260 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 TMEM179BQ7Z7N9 219 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 CPOQ8IVL8 374 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 HS3ST5Q8IZT8 346 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 TMEM86BQ8N661 226 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 BBS1Q8NFJ9 593 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 WFDC12Q8WWY7 111 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 PKP2Q99959 881 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 THTPAQ9BU02 230 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 ZNF556Q9HAH1 456 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 KAAG1Q9UBP8 84 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 MMP24Q9Y5R2 645 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 POMT1Q9Y6A1 747 aa12.81□□□□□ -0.36
TPM1-211ENST00000558314 A0A1B0GVI7 797 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 A0A1W2PQ09 198 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 CLPSL1A2RUU4 121 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 BTBD17A6NE02 478 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 MRPL3P09001 348 aaKnown RBP12.8□□□□□ -0.36
TPM1-211ENST00000558314 PRKACGP22612 351 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 EEF1B2P24534 225 aaKnown RBP12.8□□□□□ -0.36
TPM1-211ENST00000558314 ACKR3P25106 362 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 SNCBQ16143 134 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 TMEM236Q5W0B7 351 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 KRT77Q7Z794 578 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 ADGRG5Q8IZF4 528 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 PNKDQ8N490 385 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 GALNT4Q8N4A0 578 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 CCDC197Q8NCU1 140 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 OTOSQ8NHW6 89 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 ITPKCQ96DU7 683 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 ASB9Q96DX5 294 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 RGCCQ9H4X1 137 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 HAO2Q9NYQ3 351 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 LAMP5Q9UJQ1 280 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 KLHDC2Q9Y2U9 406 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 KPTNQ9Y664 436 aa12.8□□□□□ -0.36
TPM1-211ENST00000558314 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.79□□□□□ -0.36
TPM1-211ENST00000558314 NDUFA7O95182 113 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 PAHP00439 452 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 HMGN1P05114 100 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 IER3P46695 156 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 GPM6AP51674 278 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 CAPZA1P52907 286 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 CEP78Q5JTW2 689 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 CD300LDQ6UXZ3 194 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 SPATA24Q86W54 205 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 ZDHHC23Q8IYP9 409 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 OR8B12Q8NGG6 310 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 CANT1Q8WVQ1 401 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 OR5P3Q8WZ94 311 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 DYRK2Q92630 601 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 LYZL4Q96KX0 146 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 DPAGT1Q9H3H5 408 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 ELL3Q9HB65 397 aaPredicted RBP12.79□□□□□ -0.36
TPM1-211ENST00000558314 GTF2A1LQ9UNN4 478 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 CAB39Q9Y376 341 aaPredicted RBP12.79□□□□□ -0.36
TPM1-211ENST00000558314 LRP12Q9Y561 859 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 MPC1Q9Y5U8 109 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 MEGF8Q7Z7M0 2845 aa12.79□□□□□ -0.36
TPM1-211ENST00000558314 OSMP13725 252 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 GLRA1P23415 457 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 APOFQ13790 326 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 STUMQ69YW2 141 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 THAP5Q7Z6K1 395 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 UBE2FQ969M7 185 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 C12orf43Q96C57 262 aaKnown RBP12.78□□□□□ -0.36
TPM1-211ENST00000558314 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 RAB3IPQ96QF0 476 aaPredicted RBP12.78□□□□□ -0.36
TPM1-211ENST00000558314 DCTN5Q9BTE1 182 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 TEX12Q9BXU0 123 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 NIPAL2Q9H841 368 aa12.78□□□□□ -0.36
TPM1-211ENST00000558314 TVP23BQ9NYZ1 205 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms