RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 GGT3PA6NGU5 568 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ZNF593O00488 134 aaPredicted RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 PHYHO14832 338 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 RGS10O43665 173 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 LY6HO94772 140 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 GLCEO94923 617 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MPZL1O95297 269 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 TGFAP01135 160 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 HPXP02790 462 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 PYCR1P32322 319 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ERVS71-1P61550 626 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CDK5R2Q13319 367 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ASAH1Q13510 395 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 SNAPC1Q16533 368 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ALKBH6Q3KRA9 238 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 TIMM50Q3ZCQ8 353 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 Q5BKY6 102 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 DCXRQ7Z4W1 244 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 LINC00346Q8IVM7 164 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 RDH10Q8IZV5 341 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 KLHL36Q8N4N3 616 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ZNF283Q8N7M2 679 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 OR8G5Q8NG78 346 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 OR2Z1Q8NG97 314 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 OR9Q1Q8NGQ5 310 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CCL17Q92583 94 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 HYLS1Q96M11 299 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MNTQ99583 582 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 KCNJ15Q99712 375 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 C1QTNF5Q9BXJ0 243 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 TRIM36Q9NQ86 728 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 PLSCR3Q9NRY6 295 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ZNF275Q9NSD4 429 aaPredicted RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 HRNRQ86YZ3 2850 aaPredicted RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 LOC100130705A0A1B0GUX0 176 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CCDC182A6NF36 153 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ANKRD30BLA7E2S9 258 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 INAFM1C9JVW0 142 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 AIREO43918 545 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CDC14BO60729 498 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 SNAPC5O75971 98 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 SLC22A5O76082 557 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 NGFP01138 241 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 IGHV1-46P01743 117 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 H2BFMP0C1H6 154 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CD36P16671 472 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 GATA3P23771 443 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 TGFBR2P37173 567 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MAGEB1P43366 347 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MMP15P51511 669 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CRISP1P54107 249 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 NCS1P62166 190 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 PSG7Q13046 419 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 EIF2B1Q14232 305 aaKnown RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 MEP1BQ16820 701 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 KLHL12Q53G59 568 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CORO6Q6QEF8 472 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 GID4Q8IVV7 300 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ZCCHC24Q8N2G6 241 aaKnown RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 STX19Q8N4C7 294 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MAPK1IP1LQ8NDC0 245 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 OR6N2Q8NGY6 317 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ENKURQ8TC29 256 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ASB17Q8WXJ9 295 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 UFD1Q92890 307 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 SLAMF6Q96DU3 332 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 WDFY2Q96P53 400 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MBOAT4Q96T53 435 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 GAL3ST1Q99999 423 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 NIPSNAP1Q9BPW8 284 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 SLC30A2Q9BRI3 323 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 PLA2G12AQ9BZM1 189 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 C6orf62Q9GZU0 229 aaPredicted RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 OR10A2Q9H208 303 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 OR51V1Q9H2C8 321 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 SLC25A19Q9HC21 320 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 ACOT13Q9NPJ3 140 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 C14orf119Q9NWQ9 140 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MYEF2Q9P2K5 600 aaKnown RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 ELF5Q9UKW6 265 aaPredicted RBP7.38□□□□□ -1.23
USP3-208ENST00000558285 PPP1R3CQ9UQK1 317 aa7.38□□□□□ -1.23
USP3-208ENST00000558285 MTORP42345 2549 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 TEP1Q99973 2627 aaKnown RBP7.37□□□□□ -1.23
USP3-208ENST00000558285 IGHV4-61A0A0C4DH41 118 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 IQCF6A8MYZ5 107 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 DCTN6O00399 190 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 ANXA2P07355 339 aaKnown RBP7.37□□□□□ -1.23
USP3-208ENST00000558285 IGFBP1P08833 259 aaPredicted RBP7.37□□□□□ -1.23
USP3-208ENST00000558285 ACSM4P0C7M7 580 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 FAM157CP0CG43 387 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 IGHV4-31P0DP07 118 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 RAB3AP20336 220 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 PSMB9P28065 219 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 SRP14P37108 136 aaKnown RBP7.37□□□□□ -1.23
USP3-208ENST00000558285 GNALP38405 381 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 MPV17P39210 176 aa7.37□□□□□ -1.23
USP3-208ENST00000558285 GBX2P52951 348 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms