RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 OR3A4PP47883 348 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 SRP9P49458 86 aaKnown RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 BCAP31P51572 246 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 TDGF1P3P51864 188 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 RAB1AP62820 205 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 FAM3AP98173 230 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 UNC119Q13432 240 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 KLF9Q13886 244 aaPredicted RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 GPR176Q14439 515 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 TSC22D1Q15714 1073 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 GABRA6Q16445 453 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 LINC00303Q3SY05 128 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 TMEM69Q5SWH9 247 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 TMEM42Q69YG0 159 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 UTS2BQ765I0 119 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 MDP1Q86V88 176 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 CDH26Q8IXH8 852 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 CADM3Q8N126 398 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 CNEP1R1Q8N9A8 125 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 C19orf18Q8NEA5 215 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 CCDC54Q8NEL0 328 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 OR6K3Q8NGY3 331 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 MBD3L2Q8NHZ7 208 aaPredicted RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 SMIM4Q8WVI0 70 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 STARD4Q96DR4 205 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 S100A16Q96FQ6 103 aaKnown RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 SORCS2Q96PQ0 1159 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 CHST5Q9GZS9 411 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 MMP28Q9H239 520 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 PLEKHA1Q9HB21 404 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 ZNF71Q9NQZ8 489 aaPredicted RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 PLSCR4Q9NRQ2 329 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 GPR173Q9NS66 373 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 POLR3KQ9Y2Y1 108 aaPredicted RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 RBMX2Q9Y388 322 aaKnown RBP6.37□□□□□ -1.39
SPG11-204ENST00000557866 RTTNQ86VV8 2226 aa6.37□□□□□ -1.39
SPG11-204ENST00000557866 A0A0A6YYD4 124 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 MEIOCA2RUB1 952 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 C5orf49A4QMS7 147 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 GGT3PA6NGU5 568 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 DHRS7CA6NNS2 312 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 TMEM14DPA8MWL7 114 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 GABARAPH6UMI1 98 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 LYRM1O43325 122 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 GMDSO60547 372 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 MTRF1O75570 445 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 LYZL6O75951 148 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 TPPPO94811 219 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 NGFP01138 241 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 ERCC1P07992 297 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 CELA3BP08861 270 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 COX5AP20674 150 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 STOMP27105 288 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 ZNF93P35789 620 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 WNT5AP41221 380 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 TMPRSS3P57727 454 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 PITPNAQ00169 270 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 RIPPLY1Q0D2K3 151 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 MOGAT2Q3SYC2 334 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 KRTCAP3Q53RY4 240 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 PRR30Q53SZ7 412 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 C1orf185Q5T7R7 199 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 ZNF57Q68EA5 555 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 OR2A2Q6IF42 318 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 TMEM53Q6P2H8 277 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 Q6ZT83 130 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 REC114Q7Z4M0 266 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 C1QL2Q7Z5L3 287 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 DPPA2Q7Z7J5 298 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 RTN4RL2Q86UN3 420 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 MYPOPQ86VE0 399 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 ANGPTL5Q86XS5 388 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 GABRG1Q8N1C3 465 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 CISD2Q8N5K1 135 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 ZNF610Q8N9Z0 462 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 WDR31Q8NA23 367 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 NAXEQ8NCW5 288 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 NPRL2Q8WTW4 380 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 SNRNP27Q8WVK2 155 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 PP6455Q8WZ26 134 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 C10orf35Q96D05 121 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 ZC3HAV1LQ96H79 300 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 CYYR1Q96J86 154 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 GAL3ST1Q99999 423 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 FGF23Q9GZV9 251 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 SLC22A4Q9H015 551 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 OPN3Q9H1Y3 402 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 RBFOX1Q9NWB1 397 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 MRPL15Q9P015 296 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 RABL2AQ9UBK7 228 aaPredicted RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 FBLN5Q9UBX5 448 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 RAB22AQ9UL26 194 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 RABL2BQ9UNT1 228 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 MRPS28Q9Y2Q9 187 aaKnown RBP6.36□□□□□ -1.39
SPG11-204ENST00000557866 STARD10Q9Y365 291 aa6.36□□□□□ -1.39
SPG11-204ENST00000557866 BOD1L1Q8NFC6 3051 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 CACNA1GO43497 2377 aa6.35□□□□□ -1.39
SPG11-204ENST00000557866 IGKV1-27A0A075B6S5 117 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms