RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ATP6V1FQ16864 119 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 KRTAP27-1Q3LI81 207 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ACTBL2Q562R1 376 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 COA6Q5JTJ3 125 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 FRMPD2BQ6IN97 320 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SPOPLQ6IQ16 392 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 WDR82Q6UXN9 313 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 NPSR1Q6W5P4 371 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 IL34Q6ZMJ4 242 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TEX43Q6ZNM6 134 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF493Q6ZR52 646 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 COX15Q7KZN9 410 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SMIM15Q7Z3B0 74 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 TAC4Q86UU9 113 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 GID4Q8IVV7 300 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PGAM4Q8N0Y7 254 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CYP4Z2PQ8N1L4 340 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CBR4Q8N4T8 237 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 WDR31Q8NA23 367 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 MDS2Q8NDY4 140 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ATP6V1C2Q8NEY4 427 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 OR8K1Q8NGG5 319 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 OR6K6Q8NGW6 343 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 OR10J6PQ8NGY7 276 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 OR5AK3PQ8NH89 298 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PYDC1Q8WXC3 89 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 IFT81Q8WYA0 676 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 C22orf15Q8WYQ4 148 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 SLC35B4Q969S0 331 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CENPNQ96H22 339 aaPredicted RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CCDC42Q96M95 316 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 RBBP8Q99708 897 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CIB1Q99828 191 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 CHRNA10Q9GZZ6 450 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ING2Q9H160 280 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 C12orf10Q9HB07 376 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PLEKHJ1Q9NW61 149 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 MAT2BQ9NZL9 334 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 UVRAGQ9P2Y5 699 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 PCYOX1Q9UHG3 505 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 AP3M1Q9Y2T2 418 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 WIF1Q9Y5W5 379 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 XIRP1Q702N8 1843 aaKnown RBP2.25□□□□□ -2.05
TRAV28-201ENST00000557548 DISP1Q96F81 1524 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ADGRL1O94910 1474 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 ADGRL3Q9HAR2 1447 aa2.25□□□□□ -2.05
TRAV28-201ENST00000557548 NFASCO94856 1347 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 MN1Q10571 1320 aaPredicted RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 A6NDN8 102 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 GJE1A6NN92 205 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ANKRD65E5RJM6 399 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 hCG_2039718K7EN88 272 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PHOX2AO14813 284 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ADAP1O75689 374 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 LYPLA2O95372 231 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 FABP3P05413 133 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 OR8U9P0C7N5 309 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PGA4P0DJD7 388 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PGA3P0DJD8 388 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PGA5P0DJD9 388 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 GIMD1P0DJR0 217 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 COX5BP10606 129 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CD37P11049 281 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ATF6P18850 670 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 RAB5AP20339 215 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 FUT3P21217 361 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 DTYMKP23919 212 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ZBTB25P24278 435 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 MAGEA3P43357 314 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CAPZBP47756 277 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PRLHRP49683 370 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF121P58317 390 aaPredicted RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SLC35B1P78383 322 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SLC7A9P82251 487 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CKAP4Q07065 602 aaKnown RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SMARCB1Q12824 385 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CDC20Q12834 499 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 PSG5Q15238 335 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ZBTB6Q15916 424 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 TMEM249Q2WGJ8 235 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 TTLL9Q3SXZ7 439 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 YIF1BQ5BJH7 314 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 GCSAMLQ5JQS6 135 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 OGFRL1Q5TC84 451 aaPredicted RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 SDHAF4Q5VUM1 108 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 APOBEC3HQ6NTF7 200 aaKnown RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 RWDD4Q6NW29 188 aaKnown RBP2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ZNF774Q6NX45 483 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 FAHD1Q6P587 224 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CD300LGQ6UXG3 332 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CCDC121Q6ZUS5 278 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 ZFP82Q8N141 532 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 Q8N402 240 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 TMEM156Q8N614 296 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 CHST4Q8NCG5 386 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 NPBQ8NG41 125 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 OR10AD1Q8NGE0 317 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 OR5B17Q8NGF7 314 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 OR8U1Q8NH10 309 aa2.24□□□□□ -2.05
TRAV28-201ENST00000557548 OR6X1Q8NH79 312 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms