RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CECR9P0C854 216 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 PSKH1P11801 424 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 B4GALT1P15291 398 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 CALCRP30988 508 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 IDH3GP51553 393 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-230ENST00000557427 DVL1P1P54792 670 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-230ENST00000557427 SCN1BQ07699 218 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 BAK1Q16611 211 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 Q499Y3 187 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 CEP78Q5JTW2 689 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 C1QTNF12Q5T7M4 302 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 LRFN4Q6PJG9 635 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF679Q8IYX0 411 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 SLC26A10Q8NG04 563 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 OR6X1Q8NH79 312 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 RGP1Q92546 391 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-230ENST00000557427 NSMAFQ92636 917 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 CMTM3Q96MX0 182 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 DERL3Q96Q80 235 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 MRPL13Q9BYD1 178 aaKnown RBP10.69□□□□□ -0.7
SHMT2-230ENST00000557427 COMMD4Q9H0A8 199 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 CYSLTR2Q9NS75 346 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 C14orf119Q9NWQ9 140 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 SLCO1C1Q9NYB5 712 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 GLTPQ9NZD2 209 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 FRRS1LQ9P0K9 344 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 TBC1D24Q9ULP9 559 aa10.69□□□□□ -0.7
SHMT2-230ENST00000557427 COA3Q9Y2R0 106 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-230ENST00000557427 PIN1P1O15428 100 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF254O75437 659 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 QDPRP09417 244 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 SPARCP09486 303 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 PATE4P0C8F1 98 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 ZNF823P16415 610 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 ELK1P19419 428 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 SRMP19623 302 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 NPR2P20594 1047 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 AZGP1P25311 298 aaKnown RBP10.68□□□□□ -0.7
SHMT2-230ENST00000557427 ARR3P36575 388 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 OR10A3P58181 314 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 NAAAQ02083 359 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 ASAH1Q13510 395 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 EIF2B1Q14232 305 aaKnown RBP10.68□□□□□ -0.7
SHMT2-230ENST00000557427 MEP1BQ16820 701 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 THEM4Q5T1C6 240 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 GDPD3Q7L5L3 318 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 MYPOPQ86VE0 399 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-230ENST00000557427 CCDC36Q8IYA8 594 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 HPS1Q92902 700 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 TMEM54Q969K7 222 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 SLC25A44Q96H78 314 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-230ENST00000557427 C4orf45Q96LM5 186 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 RBP7Q96R05 134 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 AMELYQ99218 206 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 MRI1Q9BV20 369 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 ABHD6Q9BV23 337 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 NOX4Q9NPH5 578 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 B3GNT2Q9NY97 397 aa10.68□□□□□ -0.7
SHMT2-230ENST00000557427 TRBV5-7A0A0A0MS05 114 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 A0A1W2PQ09 198 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 FAM25AB3EWG3 89 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 FAM25CB3EWG5 89 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 FAM25GB3EWG6 89 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 IGKV3-15P01624 115 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 IGLV1-44P01699 117 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 OR4A8P0C604 315 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 GIFP27352 417 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 SERPINF1P36955 418 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 TALDO1P37837 337 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 KIR3DL2P43630 455 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 RIDAP52758 137 aaKnown RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 CLRN1P58418 232 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 RAB1AP62820 205 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 HGFACQ04756 655 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 DEGS2Q6QHC5 323 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 CCBE1Q6UXH8 406 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 C1orf229Q6ZS94 237 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 KRT77Q7Z794 578 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 GLB1L2Q8IW92 636 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 SKA3Q8IX90 412 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 FAM169BQ8N8A8 192 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 NOXO1Q8NFA2 376 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 TRMT10AQ8TBZ6 339 aaKnown RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 MRPL24Q96A35 216 aaKnown RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 KCNJ15Q99712 375 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 FOXB1Q99853 325 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 ELOVL3Q9HB03 270 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 NOX3Q9HBY0 568 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 MYOZ1Q9NP98 299 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 RHBDL2Q9NX52 303 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 RABL2AQ9UBK7 228 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-230ENST00000557427 EXTL2Q9UBQ6 330 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 RABL2BQ9UNT1 228 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 SPEF1Q9Y4P9 236 aa10.67□□□□□ -0.7
SHMT2-230ENST00000557427 A0A1W2PPK0 400 aa10.66□□□□□ -0.7
SHMT2-230ENST00000557427 ACOD1A6NK06 481 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms