RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ALOX5APP20292 161 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 PCSK6P29122 969 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 CLDN12P56749 244 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 LSM6P62312 80 aaKnown RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 CDK5R1Q15078 307 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TMPRSS11FQ6ZWK6 438 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 OR4F17Q8NGA8 305 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 OR4F5Q8NH21 305 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 OR4F4Q96R69 305 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 MED29Q9NX70 200 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 DNASE2O00115 360 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 SULT1A3P0DMM9 295 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 SULT1A4P0DMN0 295 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 RRASP10301 218 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 MPGP29372 298 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 PMS2CLQ68D20 193 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TMEM92Q6UXU6 159 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 OR10R2Q8NGX6 335 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 OR2G2Q8NGZ5 317 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 RNF2Q99496 336 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TRIOBPQ9H2D6 2365 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 A0A0B4J2E0 115 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 A0A1B0GX12 115 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 PGA3P0DJD8 388 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 S100A4P26447 101 aaKnown RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 ZNF141Q15928 474 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TAF9Q16594 264 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 COL13A1Q5TAT6 717 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 SLC25A42Q86VD7 318 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 SIAH3Q8IW03 269 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 SFTPA2Q8IWL1 248 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 SFTPA1Q8IWL2 248 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 PTP4A1Q93096 173 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 ARHGDIGQ99819 225 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 CXCL16Q9H2A7 254 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 SAP30LQ9HAJ7 183 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TAF9BQ9HBM6 251 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 INTS1Q8N201 2190 aaKnown RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 LANCL1O43813 399 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 RPL7L1Q6DKI1 246 aaKnown RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 ZNF439Q8NDP4 499 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 SIGLEC11Q96RL6 698 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 PDCD1LG2Q9BQ51 273 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 FGF20Q9NP95 211 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 PRDM7Q9NQW5 492 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 AHCTF1Q8WYP5 2266 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TMEM210A6NLX4 147 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 GIPP09681 153 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 CTRB1P17538 263 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 S100A11P31949 105 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 FCGR2CP31995 323 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 GP2P55259 537 aaKnown RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 SOX8P57073 446 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 P2RY6Q15077 328 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 CTRB2Q6GPI1 263 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 FUNDC1Q8IVP5 155 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 TMEM99Q8N816 258 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 OR13F1Q8NGS4 319 aa7.5□□□□□ -1.21
CHD8-213ENST00000557364 CNRIP1Q96F85 164 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 ZNF71Q9NQZ8 489 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 COL11A1P12107 1806 aaPredicted RBP7.5□□□□□ -1.21
CHD8-213ENST00000557364 IFITM5A6NNB3 132 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 FPR2P25090 351 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 SKP2Q13309 424 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 STUMQ69YW2 141 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 ADAM5Q6NVV9 412 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 LIMS2Q7Z4I7 341 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 ADPRHL1Q8NDY3 354 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 YIPF5Q969M3 257 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 HINT3Q9NQE9 182 aaKnown RBP7.49□□□□□ -1.21
CHD8-213ENST00000557364 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 BRWD3Q6RI45 1802 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 SEC14L6B5MCN3 397 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 CCL21O00585 134 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 TNFSF12O43508 249 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 OR7C2O60412 319 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 TRAPPC2P0DI81 140 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 TRAPPC2BP0DI82 140 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 OR5H8P0DN80 308 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 FAM53CQ9NYF3 392 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 GFRA3O60609 400 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 RFC3P40938 356 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 EMDP50402 254 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 Q56UQ5 140 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 BAGE2Q86Y30 109 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 OR52L2PQ8NGH6 319 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 DUS3LQ96G46 650 aaKnown RBP7.49□□□□□ -1.21
CHD8-213ENST00000557364 RASL11BQ9BPW5 248 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 IGHV3-15A0A0B4J1V0 119 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 LRP3O75074 770 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 CA11O75493 328 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 TMEM11P17152 192 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 PWWP2BQ6NUJ5 590 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 CORO6Q6QEF8 472 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 KIRREL2Q6UWL6 708 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 OR8B4Q96RC9 309 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 SARGQ9BW04 601 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 STRCP1A6NGW2 1772 aa7.49□□□□□ -1.21
CHD8-213ENST00000557364 SNRPGP15A8MWD9 76 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms