RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RNPEPL1Q9HAU8 725 aa19.14■□□□□ 0.65
TDP1-216ENST00000556867 MIOXQ9UGB7 285 aa19.14■□□□□ 0.65
TDP1-216ENST00000556867 SLC22A13Q9Y226 551 aa19.14■□□□□ 0.65
TDP1-216ENST00000556867 LRCH1Q9Y2L9 728 aa19.14■□□□□ 0.65
TDP1-216ENST00000556867 POLR3KQ9Y2Y1 108 aaPredicted RBP19.14■□□□□ 0.65
TDP1-216ENST00000556867 PPIAL4CA0A0B4J2A2 164 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 A0A1B0GTI1 187 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 TMEM210A6NLX4 147 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 LGALS8O00214 317 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 RPS2P15880 293 aaKnown RBP19.13■□□□□ 0.65
TDP1-216ENST00000556867 SRD5A1P18405 259 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 CCL1P22362 96 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 ZFP36P26651 326 aaKnown RBP19.13■□□□□ 0.65
TDP1-216ENST00000556867 SEC61A1P61619 476 aaKnown RBP19.13■□□□□ 0.65
TDP1-216ENST00000556867 CSNK2BP67870 215 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 LCN2P80188 198 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 TP53I3Q53FA7 332 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 OGFRL1Q5TC84 451 aaPredicted RBP19.13■□□□□ 0.65
TDP1-216ENST00000556867 DCDC5Q6ZRR9 648 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 THAP5Q7Z6K1 395 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 GCSAMQ8N6F7 178 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 ACBD7Q8N6N7 88 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 FGF23Q9GZV9 251 aaPredicted RBP19.13■□□□□ 0.65
TDP1-216ENST00000556867 ACOXLQ9NUZ1 547 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 GNG8Q9UK08 70 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 PIGLQ9Y2B2 252 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 V9GYS6 101 aa19.13■□□□□ 0.65
TDP1-216ENST00000556867 A0A0G2JMP0 313 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 A0A0X1KG70 313 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 hCG_1807616A0A1W2PRN6 198 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 DAPL1A0PJW8 107 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 DHRS7CA6NNS2 312 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 LHBP01229 141 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 FAHP16930 419 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 GATA3P23771 443 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 CD80P33681 288 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 THBS2P35442 1172 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 CFHR2P36980 270 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 HOXA4Q00056 320 aaPredicted RBP19.12■□□□□ 0.65
TDP1-216ENST00000556867 ESCO2Q56NI9 601 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 FAM76BQ5HYJ3 339 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 TTC23Q5W5X9 447 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 KCTD20Q7Z5Y7 419 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 C19orf18Q8NEA5 215 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 OR4M2Q8NGB6 313 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 NEIL1Q96FI4 390 aaPredicted RBP19.12■□□□□ 0.65
TDP1-216ENST00000556867 RNF170Q96K19 258 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 HIST1H2AAQ96QV6 131 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 DCLRE1BQ9H816 532 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 TRIM36Q9NQ86 728 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 ENPP5Q9UJA9 477 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 MXRA5Q9NR99 2828 aa19.12■□□□□ 0.65
TDP1-216ENST00000556867 KIAA1324LA8MWY0 1029 aaPredicted RBP19.11■□□□□ 0.65
TDP1-216ENST00000556867 J3QLI3 93 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 P2RY10O00398 339 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 ELF3P78545 371 aaPredicted RBP19.11■□□□□ 0.65
TDP1-216ENST00000556867 RAB40BQ12829 278 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 KCNJ8Q15842 424 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 ZNF691Q5VV52 312 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 DCAF12L2Q5VW00 463 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 WDR82Q6UXN9 313 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 DOK3Q7L591 496 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 BOLLQ8N9W6 283 aaKnown RBP19.11■□□□□ 0.65
TDP1-216ENST00000556867 DEFB108BQ8NET1 73 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 OR14K1Q8NGZ2 314 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 CYGBQ8WWM9 190 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 RNF166Q96A37 237 aaPredicted RBP19.11■□□□□ 0.65
TDP1-216ENST00000556867 AMBNQ9NP70 447 aa19.11■□□□□ 0.65
TDP1-216ENST00000556867 MRPS18AQ9NVS2 196 aaKnown RBP19.11■□□□□ 0.65
TDP1-216ENST00000556867 RPL36Q9Y3U8 105 aaKnown RBP19.11■□□□□ 0.65
TDP1-216ENST00000556867 TRAV38-1A0A0B4J264 116 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 OOEPA6NGQ2 149 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 WBP4O75554 376 aaKnown RBP19.1■□□□□ 0.65
TDP1-216ENST00000556867 FADS2O95864 444 aaKnown RBP19.1■□□□□ 0.65
TDP1-216ENST00000556867 IFNA2P01563 188 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 IGHA1P01876 353 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 EGR1P18146 543 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 ACTA2P62736 377 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 ACTG2P63267 376 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 CEACAM21Q3KPI0 293 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 WDR38Q5JTN6 314 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 TMEM42Q69YG0 159 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 FAHD2BQ6P2I3 314 aaPredicted RBP19.1■□□□□ 0.65
TDP1-216ENST00000556867 NLRC3Q7RTR2 1065 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 PRSS35Q8N3Z0 413 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 OR8B3Q8NGG8 313 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 LRRC29Q8WV35 223 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 MRPL48Q96GC5 212 aaKnown RBP19.1■□□□□ 0.65
TDP1-216ENST00000556867 FAHD2AQ96GK7 314 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 OR8B2Q96RD0 313 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 SSBP3Q9BWW4 388 aaPredicted RBP19.1■□□□□ 0.65
TDP1-216ENST00000556867 TMPRSS13Q9BYE2 586 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 METTL17Q9H7H0 456 aaPredicted RBP19.1■□□□□ 0.65
TDP1-216ENST00000556867 INPP5EQ9NRR6 644 aa19.1■□□□□ 0.65
TDP1-216ENST00000556867 ATRQ13535 2644 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 OR5B21A6NL26 309 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 C3orf80F5H4A9 247 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 CDIPTO14735 213 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 CLIC3O95833 236 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 PSMB10P40306 273 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms