RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PPIAL4GP0DN37 164 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF12P17014 697 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 OPRL1P41146 370 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MTNR1AP48039 350 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF121P58317 390 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 ESRRGP62508 458 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 CDK5Q00535 292 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 IL5RAQ01344 420 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 CNN3Q15417 329 aaKnown RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MPPED2Q15777 294 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 LINC01590Q5TEZ4 76 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 LCN1P1Q5VSP4 162 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 SFRP4Q6FHJ7 346 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 TIGD4Q8IY51 512 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 C3orf56Q8N813 242 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 PNLDC1Q8NA58 520 aaKnown RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 PAPD5Q8NDF8 572 aaKnown RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 UBE2FQ969M7 185 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 SPSB4Q96A44 273 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 SGK3Q96BR1 496 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 TECTBQ96PL2 329 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 SLC6A7Q99884 636 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MICU1Q9BPX6 476 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 PAPOLGQ9BWT3 736 aaKnown RBP6.13□□□□□ -1.43
SCFD1-222ENST00000556768 MARCH7Q9H992 704 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 C1orf123Q9NWV4 160 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 OPN4Q9UHM6 478 aa6.13□□□□□ -1.43
SCFD1-222ENST00000556768 KIR2DS1A0A191URI9 304 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 OOEPA6NGQ2 149 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 F5H0A9 414 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-222ENST00000556768 LGALS8O00214 317 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 ADAM20O43506 726 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 ENSAO43768 121 aaKnown RBP6.12□□□□□ -1.43
SCFD1-222ENST00000556768 CIB2O75838 187 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 FCGR1AP12314 374 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 FASP25445 335 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 PMELP40967 661 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 GSK3AP49840 483 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 CRISP1P54107 249 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 BPIFB3P59826 476 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 SEC61A1P61619 476 aaKnown RBP6.12□□□□□ -1.43
SCFD1-222ENST00000556768 FAM3AP98173 230 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 PAX8Q06710 450 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 BNIP1Q12981 228 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 C1orf146Q5VVC0 180 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 PRAMEF6Q5VXH4 476 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 DEGS2Q6QHC5 323 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 KCTD8Q6ZWB6 473 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 COMMD2Q86X83 199 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 FAM81AQ8TBF8 368 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 ASB17Q8WXJ9 295 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 ITFG2Q969R8 447 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 SLC25A28Q96A46 364 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 SLC7A6OSQ96CW6 309 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-222ENST00000556768 TEAD3Q99594 435 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 NUDT16L1Q9BRJ7 211 aaKnown RBP6.12□□□□□ -1.43
SCFD1-222ENST00000556768 YIPF3Q9GZM5 350 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 RNPEPL1Q9HAU8 725 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 KRT84Q9NSB2 600 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 AP4S1Q9Y587 144 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 MPC1Q9Y5U8 109 aa6.12□□□□□ -1.43
SCFD1-222ENST00000556768 IGHV2-70DA0A0C4DH43 119 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 TMEM269A0A1B0GVZ9 245 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ACOD1A6NK06 481 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF254O75437 659 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 PTBP3O95758 552 aaKnown RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ECDO95905 644 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 MUC1P15941 1255 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 CD80P33681 288 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 PSMB10P40306 273 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 APOFQ13790 326 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 PTGES3Q15185 160 aaKnown RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 FAM201AQ5SY85 155 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 GPR157Q5UAW9 335 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 TMEM236Q5W0B7 351 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 WDR25Q64LD2 544 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 SLC36A1Q7Z2H8 476 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 TMEM179BQ7Z7N9 219 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 LYSMD2Q8IV50 215 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 HS3ST5Q8IZT8 346 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 PARP8Q8N3A8 854 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 OR5K1Q8NHB7 308 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 LRTOMTQ8WZ04 291 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 RTL8AQ9BWD3 113 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 CADM1Q9BY67 442 aaKnown RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ZMAT3Q9HA38 289 aaKnown RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 SLC25A19Q9HC21 320 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 FAM53CQ9NYF3 392 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 TMEM210A6NLX4 147 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 SELENOFO60613 162 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 MTRF1O75570 445 aaKnown RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ALOX5APP20292 161 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 PRTN3P24158 256 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ATP6V1E1P36543 226 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 BAMBIQ13145 260 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 HNRNPA0Q13151 305 aaKnown RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 ZNF829Q3KNS6 432 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-222ENST00000556768 METTL11BQ5VVY1 283 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 C10orf67Q8IYJ2 551 aa6.11□□□□□ -1.43
SCFD1-222ENST00000556768 GALNT4Q8N4A0 578 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms