RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PPP1R3EQ9H7J1 279 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 PLCXD1Q9NUJ7 323 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 UFSP2Q9NUQ7 469 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 CTSZQ9UBR2 303 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 PSORS1C1Q9UIG5 152 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 PCDHB10Q9UN67 800 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 NOP16Q9Y3C1 178 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 N6AMT1Q9Y5N5 214 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 INSIG2Q9Y5U4 225 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 LRRC30A6NM36 301 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 MYL12BO14950 172 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 CDK1P06493 297 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 H2BFMP0C1H6 154 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 ALOX5APP20292 161 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 CD80P33681 288 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 PSMB10P40306 273 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 HILS1P60008 231 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 SLC35A2P78381 396 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 EFNB1P98172 346 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 POU4F2Q12837 409 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF154Q13106 437 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 OR8B8Q15620 311 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 TIGD6Q17RP2 521 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 ESCO2Q56NI9 601 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 KLF17Q5JT82 389 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-224ENST00000556737 LRRN1Q6UXK5 716 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF841Q6ZN19 808 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 DCDC5Q6ZRR9 648 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 KCTD8Q6ZWB6 473 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 C1orf87Q8N0U7 546 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 PLPP7Q8NBV4 271 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 C19orf18Q8NEA5 215 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 OR10H4Q8NGA5 316 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 OR8B12Q8NGG6 310 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 OR52H1Q8NGJ2 320 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 LGALS12Q96DT0 336 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 NEIL1Q96FI4 390 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-224ENST00000556737 LYZL4Q96KX0 146 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 TBX5Q99593 518 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 TEAD3Q99594 435 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 SLC6A7Q99884 636 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 SSBP3Q9BWW4 388 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-224ENST00000556737 FGF23Q9GZV9 251 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-224ENST00000556737 FN3KRPQ9HA64 309 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 PAK1IP1Q9NWT1 392 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-224ENST00000556737 COPS3Q9UNS2 423 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 PPIAL4AQ9Y536 164 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 LRP12Q9Y561 859 aa8.62□□□□□ -1.03
SHMT2-224ENST00000556737 WNK2Q9Y3S1 2297 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 A0A0A6YYJ9 748 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 IGHV2-70DA0A0C4DH43 119 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 DAPL1A0PJW8 107 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 FCN3O75636 299 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 RGS9O75916 674 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-224ENST00000556737 APOC1P02654 83 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 SMIM18P0DKX4 95 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 PIPP12273 146 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-224ENST00000556737 EGR1P18146 543 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 CPT2P23786 658 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 ACKR3P25106 362 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 DDOSTP39656 456 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 MAP2K4P45985 399 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 GSK3AP49840 483 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 HCCSP53701 268 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 RAB40BQ12829 278 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 TMED1Q13445 227 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 GFOD2Q3B7J2 385 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 LIPNQ5VXI9 398 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF826PQ6ZT77 177 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 PRSS48Q7RTY5 328 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 C11orf53Q8IXP5 236 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 SLC35F2Q8IXU6 374 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-224ENST00000556737 SPERTQ8NA61 448 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 OR52I1Q8NGK6 324 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 OR11L1Q8NGX0 322 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 NANPQ8TBE9 248 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 THEM6Q8WUY1 208 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 PGAM5Q96HS1 289 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 TTTY10Q9BZA0 68 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 YIPF3Q9GZM5 350 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 OR10A2Q9H208 303 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 RGCCQ9H4X1 137 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 OCEL1Q9H607 264 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 SP140LQ9H930 580 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 C1orf123Q9NWV4 160 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 FAM206AQ9NX38 181 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 RNF7Q9UBF6 113 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 MIOXQ9UGB7 285 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 OR5V1Q9UGF6 321 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 ERGIC3Q9Y282 383 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 PCDHGB1Q9Y5G3 927 aa8.61□□□□□ -1.03
SHMT2-224ENST00000556737 ANKRD30BLA7E2S9 258 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 C22orf46C9J442 243 aa8.6□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF670-ZNF695F2Z2N8 137 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms