RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 AIMP2Q13155 320 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 MEF2DQ14814 521 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 TRIP6Q15654 476 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 MICBQ29980 383 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 DRAM2Q6UX65 266 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 TUSC5Q8IXB3 177 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 ADAD2Q8NCV1 583 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 MDS2Q8NDY4 140 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 OR51T1Q8NGJ9 327 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 FNDC9Q8TBE3 224 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 NUDT16L1Q9BRJ7 211 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 CALHM2Q9HA72 323 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 SLC7A10Q9NS82 523 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 B3GNT2Q9NY97 397 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 ABI3Q9P2A4 366 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 B4GALT7Q9UBV7 327 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 OPN4Q9UHM6 478 aa8.82□□□□□ -1
TMEM260-211ENST00000556648 NOSIPQ9Y314 301 aaKnown RBP8.82□□□□□ -1
TMEM260-211ENST00000556648 A0A096LPE4 126 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 SPAARA0A1B0GVQ0 90 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 A0A1W2PPZ6 126 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ARGFXA6NJG6 315 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 F5H5P2 479 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 CHRM2P08172 466 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 MMP7P09237 267 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 NAT2P11245 290 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 EDN3P14138 238 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 GSK3AP49840 483 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 GRK1Q15835 563 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 LY6G6FQ5SQ64 297 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 PDSS1Q5T2R2 415 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ZBTB37Q5TC79 503 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 LIN54Q6MZP7 749 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 TEX261Q6UWH6 196 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 IL22RA1Q8N6P7 574 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 SUMF1Q8NBK3 374 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 NAXEQ8NCW5 288 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ZNF680Q8NEM1 530 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 DEFB124Q8NES8 71 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 SEMA6DQ8NFY4 1073 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 PP6455Q8WZ26 134 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 HAS2Q92819 552 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 TMEM45BQ96B21 275 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ELMOD3Q96FG2 381 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 SLC25A21Q9BQT8 299 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 CST11Q9H112 138 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ELL3Q9HB65 397 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 SLC2A8Q9NY64 477 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 UPB1Q9UBR1 384 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ZNF230Q9UIE0 474 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 ANAPC10Q9UM13 185 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 U3KQ87 197 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 MYO7BQ6PIF6 2116 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 IGKV3D-15A0A087WSY6 115 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 FAM230AA0A1W2PPH8 454 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ZNF503-AS2A6NEH8 195 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ZNF587BE7ETH6 402 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 H3BUI4 141 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 CCSO14618 274 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 MSTNO14793 375 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 GALR2O43603 387 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 SPRY1O43609 319 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 ANGPTL7O43827 346 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 NME2P1O60361 137 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 SCGNO76038 276 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 APOC1P02654 83 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 SP1P08047 785 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 GSTP1P09211 210 aaKnown RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 NME2P22392 152 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ARF1P84077 181 aaKnown RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 ZNF92Q03936 586 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 DHRS2Q13268 280 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 PPP1R1AQ13522 171 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 PABPC1L2AQ5JQF8 200 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 RIPPLY2Q5TAB7 128 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 VASH2Q86V25 355 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 PNLDC1Q8NA58 520 aaKnown RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 CPEB3Q8NE35 698 aaKnown RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 OR56B1Q8NGI3 324 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 OR52H1Q8NGJ2 320 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 FBXW5Q969U6 566 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 RADILQ96JH8 1075 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 PECRQ9BY49 303 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 ALX4Q9H161 411 aaPredicted RBP8.81□□□□□ -1
TMEM260-211ENST00000556648 TIMM10BQ9Y5J6 103 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 CSAG2Q9Y5P2 127 aa8.81□□□□□ -1
TMEM260-211ENST00000556648 hCG_38984A0A1B0GV85 526 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 MRPL33O75394 65 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 MTRF1O75570 445 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 ALX3O95076 343 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 UBBP0CG47 229 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 MPZP25189 248 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 PPIAP62937 165 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 EXOSC2Q13868 293 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 TMPRSS7Q7RTY8 843 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 PIP4P1Q86T03 277 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 FAM89BQ8N5H3 189 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 C12orf45Q8N5I9 185 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms