RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 C11orf53Q8IXP5 236 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 BHLHE23Q8NDY6 225 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 OR2T12Q8NG77 320 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 SLCO4A1Q96BD0 722 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 TSSK2Q96PF2 358 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 DPAGT1Q9H3H5 408 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 FN3KRPQ9HA64 309 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 TRIM36Q9NQ86 728 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 UFSP2Q9NUQ7 469 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 MRGBPQ9NV56 204 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 INTS9Q9NV88 658 aaKnown RBP7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 GID8Q9NWU2 228 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 CMTM6Q9NX76 183 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 KIF17Q9P2E2 1029 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 CYB5R1Q9UHQ9 305 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 TMEM5Q9Y2B1 443 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 AP3M1Q9Y2T2 418 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 KPTNQ9Y664 436 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 NOTCH3Q9UM47 2321 aa7.33□□□□□ -1.24
GTF2A1-204ENST00000556268 A0A0G2JND7 137 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 LOC100653049A0A140TA62 436 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 OOEPA6NGQ2 149 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 CD300LBA8K4G0 201 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 BBIP1A8MTZ0 92 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 MRASO14807 208 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 ADAM20O43506 726 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 KRT34O76011 436 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 LCATP04180 440 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 CA6P23280 308 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 CDONQ4KMG0 1287 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 LRRC23Q53EV4 343 aaPredicted RBP7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 METTL11BQ5VVY1 283 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 PRAMEF6Q5VXH4 476 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 TEX36Q5VZQ5 186 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 PGAP1Q75T13 922 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 BTN2A1Q7KYR7 527 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 RRM2BQ7LG56 351 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC15A3Q8IY34 581 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 SPERTQ8NA61 448 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC26A10Q8NG04 563 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 PPP1R35Q8TAP8 253 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 FAM110DQ8TAY7 271 aaPredicted RBP7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 DYDC1Q8WWB3 177 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 LHX4Q969G2 390 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 DDOQ99489 341 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 FUZQ9BT04 418 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 NDEL1Q9GZM8 345 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 RERGLQ9H628 205 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 SAR1AQ9NR31 198 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 RPUSD1Q9UJJ7 312 aaKnown RBP7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 RPS6KA6Q9UK32 745 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 ENPP4Q9Y6X5 453 aa7.32□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNF816-ZNF321PA0A0X1KG74 233 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 F5H5K5 113 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 CXCR6O00574 342 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 SOCS2O14508 198 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 DVL1O14640 695 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 OTX1P32242 354 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 TGFBR2P37173 567 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 RPS6KA3P51812 740 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 TPTEP56180 551 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 ZNF92Q03936 586 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 TRAP1Q12931 704 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 SEC23BQ15437 767 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 OR8G1Q15617 311 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 RFX4Q33E94 735 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 IFI44LQ53G44 452 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 ATPAF1Q5TC12 328 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC35E4Q6ICL7 350 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 DNM1P34Q6PK57 102 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 CFAP77Q6ZQR2 320 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 C1orf122Q6ZSJ8 110 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 GCSAMQ8N6F7 178 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 SPRYD4Q8WW59 207 aaPredicted RBP7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 LRTOMTQ8WZ04 291 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 C7orf34Q96L11 122 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 TECTBQ96PL2 329 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 PITX2Q99697 317 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 ATF6BQ99941 703 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 MRPL15Q9P015 296 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 NOP16Q9Y3C1 178 aaKnown RBP7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 NBEAL2Q6ZNJ1 2754 aa7.31□□□□□ -1.24
GTF2A1-204ENST00000556268 A0A1B0GVI7 797 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 OR6C68A6NDL8 312 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 IDH3BO43837 385 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 OR10H3O60404 316 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 NXPH3O95157 252 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 GYPAP02724 150 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 OPN1MWP04001 364 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 H1F0P07305 194 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 OPN1MW2P0DN77 364 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 OPN1MW3P0DN78 364 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 RHCEP18577 417 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 TGM4P49221 684 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 LIPEQ05469 1076 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 MAPRE2Q15555 327 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 C2orf68Q2NKX9 166 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 SLC36A3Q495N2 470 aa7.3□□□□□ -1.24
GTF2A1-204ENST00000556268 PLAC9Q5JTB6 97 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms