RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 G3V4G9 280 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 H0YL77 283 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 H7C1C5 153 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 P2RY10O00398 339 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TNFRSF13BO14836 293 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SHOX2O60902 331 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SCAF4O95104 1147 aaKnown RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 RLN1P04808 185 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TSPAN19P0C672 248 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 IRF2P14316 349 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 ZNF182P17025 639 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TNFRSF1BP20333 461 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 GDNFP39905 211 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 RAP1BP61224 184 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 RPL27P61353 136 aaKnown RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 LCN6P62502 163 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 RAP1AP62834 184 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SCRN3Q0VDG4 424 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SELPLGQ14242 412 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 FAM189A2Q15884 450 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 AGKQ53H12 422 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TNFAIP8L3Q5GJ75 292 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 METTL11BQ5VVY1 283 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 WDR25Q64LD2 544 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 EPGNQ6UW88 154 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 LYPD2Q6UXB3 125 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 DLEU7Q6UYE1 221 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 GDPGP1Q6ZNW5 385 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 DCDC5Q6ZRR9 648 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 Q6ZSV7 163 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 FOXL2NBQ6ZUU3 175 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 DHDDSQ86SQ9 333 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 CDH26Q8IXH8 852 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SCCPDHQ8NBX0 429 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 BHLHE23Q8NDY6 225 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 OR8G5Q8NG78 346 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 OR13G1Q8NGZ3 307 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 RASSF5Q8WWW0 418 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SLC7A6Q92536 515 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 LHX4Q969G2 390 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 ZNF582Q96NG8 517 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TBX15Q96SF7 602 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SSX3Q99909 188 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TRIM15Q9C019 465 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 ACOXLQ9NUZ1 547 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 NKIRAS1Q9NYS0 192 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
PRKCH-220ENST00000556164 RIMS3Q9UJD0 308 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 SH3GLB1Q9Y371 365 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 MED31Q9Y3C7 131 aa4.82□□□□□ -1.64
PRKCH-220ENST00000556164 TRAV27A0A087WT01 109 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 IGHV1-69DA0A0B4J2H0 117 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 FAM230AA0A1W2PPH8 454 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 XKRY2A2RUG3 117 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 C5orf63A6NC05 138 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 BTBD17A6NE02 478 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 PSMD9O00233 223 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 FBP2O00757 339 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OGG1O15527 345 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 MLNRO43193 412 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OR5F1O95221 314 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 IGF2P01344 180 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 IGHV1-69P01742 117 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 HLA-DPB1P04440 258 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 IFI30P13284 250 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 EEF1B2P24534 225 aaKnown RBP4.81□□□□□ -1.64
PRKCH-220ENST00000556164 FPR3P25089 353 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 DUSP1P28562 367 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 PMELP40967 661 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 GATA4P43694 442 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 IER3P46695 156 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 HOXA4Q00056 320 aaPredicted RBP4.81□□□□□ -1.64
PRKCH-220ENST00000556164 MZT1Q08AG7 82 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 ACSM1Q08AH1 577 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 AQP6Q13520 282 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 NFYCQ13952 458 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 ZNF181Q2M3W8 571 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 BEAN1Q3B7T3 259 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OTPQ5XKR4 325 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 FBXW12Q6X9E4 464 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 ZNF841Q6ZN19 808 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 Q6ZPA2 131 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 PDZD9Q8IXQ8 264 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 MICU2Q8IYU8 434 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 LINC00482Q8N8I6 264 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 BOLLQ8N9W6 283 aaKnown RBP4.81□□□□□ -1.64
PRKCH-220ENST00000556164 PNLDC1Q8NA58 520 aaKnown RBP4.81□□□□□ -1.64
PRKCH-220ENST00000556164 ZSCAN4Q8NAM6 433 aaPredicted RBP4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OR5L1Q8NGL2 311 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OR11L1Q8NGX0 322 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OR51A7Q8NH64 312 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 OR10A6Q8NH74 314 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 TMEM170AQ8WVE7 144 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 C10orf82Q8WW14 230 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 LIPHQ8WWY8 451 aa4.81□□□□□ -1.64
PRKCH-220ENST00000556164 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms