RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ZMPSTE24O75844 475 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 BRI3O95415 125 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ETHE1O95571 254 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 THY1P04216 161 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CRHP06850 196 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 GP1BAP07359 652 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 H2AFZP0C0S5 128 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ZDHHC11BP0C7U3 371 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CT45A10P0DMU9 189 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 THRAP10827 490 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 LAMP1P11279 417 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 NQO1P15559 274 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 CXCR2P25025 360 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 S100PP25815 95 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 STOMP27105 288 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CDH5P33151 784 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 KDELR2P33947 212 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CYLC1P35663 651 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 ACVR1BP36896 505 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 MAGEA12P43365 314 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 OR1D4P47884 311 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 IDH2P48735 452 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 SRP9P49458 86 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 DUSP3P51452 185 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 PRKXP51817 358 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 KPNA2P52292 529 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 CLDN18P56856 261 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 GNG2P59768 71 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ESRRGP62508 458 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CCL7P80098 99 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 LCN2P80188 198 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 MRPS22P82650 360 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 PAX2Q02962 417 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CKAP4Q07065 602 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 CDKN3Q16667 212 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 TMEM249Q2WGJ8 235 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 DCAF4L1Q3SXM0 396 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 SLC36A2Q495M3 483 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 SLC22A6Q4U2R8 563 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 MEDAGQ5VYS4 303 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 TRIQKQ629K1 86 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 OLFML2AQ68BL7 652 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ELP2Q6IA86 826 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 OR52W1Q6IF63 320 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 FRMPD2BQ6IN97 320 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 SLC8B1Q6J4K2 584 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CGB2Q6NT52 195 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 SLC39A4Q6P5W5 647 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 PAMR1Q6UXH9 720 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 HACD2Q6Y1H2 254 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 FAM92BQ6ZTR7 304 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 DPY19L4Q7Z388 723 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 SERPINA9Q86WD7 417 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CBWD2Q8IUF1 395 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 FAM71AQ8IYT1 594 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 TMEM123Q8N131 208 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 Q8N402 240 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 RIBC1Q8N443 379 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 ZNF561Q8N587 486 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ALLCQ8N6M5 410 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 MFSD9Q8NBP5 474 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 KLHL30-AS1Q8NEE0 82 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 RHOXF1Q8NHV9 184 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 NUBPLQ8TB37 319 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CXorf40AQ8TE69 158 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 PHF10Q8WUB8 498 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 TFB1MQ8WVM0 346 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 DNAJB3Q8WWF6 145 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CDS1Q92903 461 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 NAT6Q93015 286 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 HAUS1Q96CS2 278 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 DNAJA3Q96EY1 480 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 C12orf57Q99622 126 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 KLHDC3Q9BQ90 382 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 AIF1LQ9BQI0 150 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 TIMM29Q9BSF4 260 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 DPH7Q9BTV6 452 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 DDA1Q9BW61 102 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 TSSK1BQ9BXA7 367 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 PLA2G2FQ9BZM2 168 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ULBP1Q9BZM6 244 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 GPN2Q9H9Y4 310 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 TIGARQ9NQ88 270 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 DUS2Q9NX74 493 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 GIN1Q9NXP7 522 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 PIPOXQ9P0Z9 390 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ZNF282Q9UDV7 671 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 PRODH2Q9UF12 536 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 OPN4Q9UHM6 478 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 B9D1Q9UPM9 204 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 ZNF337Q9Y3M9 751 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 CSDC2Q9Y534 153 aaKnown RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 TSSC4Q9Y5U2 329 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 SLC22A7Q9Y694 548 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 MAP1AP78559 2803 aaPredicted RBP2.51□□□□□ -2.01
SRP54-209ENST00000555746 NUMA1Q14980 2115 aa2.51□□□□□ -2.01
SRP54-209ENST00000555746 LRP4O75096 1905 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 KMT2CQ8NEZ4 4911 aaKnown RBP2.5□□□□□ -2.01
SRP54-209ENST00000555746 A0A1B0GVG6 124 aa2.5□□□□□ -2.01
SRP54-209ENST00000555746 METTL15A6NJ78 407 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms