RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR8B12Q8NGG6 310 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 LRRC29Q8WV35 223 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 GCDHQ92947 438 aaPredicted RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 CENPNQ96H22 339 aaPredicted RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 LYZL4Q96KX0 146 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 TECTBQ96PL2 329 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 CNN2Q99439 309 aaKnown RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 MOB1AQ9H8S9 216 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 FAM206AQ9NX38 181 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 H2AFY2Q9P0M6 372 aaPredicted RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 NUFIP1Q9UHK0 495 aaKnown RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 DHRS7CA6NNS2 312 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.82□□□□□ -0.84
VRK1-204ENST00000555351 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
VRK1-204ENST00000555351 IGHV4-38-2P0DP08 117 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 HKR1P10072 659 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 FGF12P61328 243 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 EGR3Q06889 387 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 POU4F2Q12837 409 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 TMED1Q13445 227 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 PDCD1Q15116 288 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 CEACAM21Q3KPI0 293 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 GPR157Q5UAW9 335 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 Q6ZSR3 168 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 ZDHHC23Q8IYP9 409 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 BOLLQ8N9W6 283 aaKnown RBP9.82□□□□□ -0.84
VRK1-204ENST00000555351 C19orf18Q8NEA5 215 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 FAM81AQ8TBF8 368 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 C22orf15Q8WYQ4 148 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 SLC25A28Q96A46 364 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 HIST1H2AAQ96QV6 131 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 PKP2Q99959 881 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 GABARAPL3Q9BY60 117 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 NOX4Q9NPH5 578 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 CLN6Q9NWW5 311 aa9.82□□□□□ -0.84
VRK1-204ENST00000555351 TRAV40A0A0B4J280 105 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 DNAJC9-AS1A6NH13 148 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 OR5B21A6NL26 309 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 ZNF850A8MQ14 1090 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 DVL1O14640 695 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 CDIPTO14735 213 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 TMPRSS2O15393 492 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 MTRF1O75570 445 aaKnown RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 CIB2O75838 187 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 RGS9O75916 674 aaPredicted RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 GYPAP02724 150 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 MMP9P14780 707 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 EGR1P18146 543 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 CFPP27918 469 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 TGM4P49221 684 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 GNG3P63215 75 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 RIPPLY1Q0D2K3 151 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 FOXL1Q12952 345 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 BAMBIQ13145 260 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 METTL11BQ5VVY1 283 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 STUMQ69YW2 141 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 ZNF322Q6U7Q0 402 aaPredicted RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 KIR3DL3Q8N743 410 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 TCEANCQ8N8B7 351 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 SCCPDHQ8NBX0 429 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 OR5A2Q8NGI9 324 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 MED30Q96HR3 178 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 ZNF48Q96MX3 618 aaPredicted RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 WDFY2Q96P53 400 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 PBOV1Q9GZY1 135 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 ADGRL4Q9HBW9 690 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 SMURF1Q9HCE7 757 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 WARS2Q9UGM6 360 aaKnown RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 RPUSD1Q9UJJ7 312 aaKnown RBP9.81□□□□□ -0.84
VRK1-204ENST00000555351 KPTNQ9Y664 436 aa9.81□□□□□ -0.84
VRK1-204ENST00000555351 ZNF670-ZNF695F2Z2N8 137 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 NDUFB3O43676 98 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 MITFO75030 526 aaPredicted RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 SRSF10O75494 262 aaKnown RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 DHRS3O75911 302 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 TOX4O94842 621 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 MRPL3P09001 348 aaKnown RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 EPHA2P29317 976 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 HCCSP53701 268 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 CSNK2BP67870 215 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 WDR38Q5JTN6 314 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 METAP1DQ6UB28 335 aaPredicted RBP9.8□□□□□ -0.84
VRK1-204ENST00000555351 C1orf122Q6ZSJ8 110 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 BTN2A1Q7KYR7 527 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 ASRGL1Q7L266 308 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 THAP5Q7Z6K1 395 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 AMIGO2Q86SJ2 522 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 SLC35F2Q8IXU6 374 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 C10orf67Q8IYJ2 551 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 TMEM86BQ8N661 226 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 LY6G5BQ8NDX9 201 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 OR8J1Q8NGP2 316 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 C8orf46Q8TAG6 207 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 HPSE2Q8WWQ2 592 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 LRTOMTQ8WZ04 291 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 PIGCQ92535 297 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 RFKQ969G6 155 aa9.8□□□□□ -0.84
VRK1-204ENST00000555351 RNF170Q96K19 258 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms