RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 DUS3LQ96G46 650 aaKnown RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF799Q96GE5 643 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 DDOQ99489 341 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 COQ7Q99807 217 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 APOL4Q9BPW4 351 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 ADI1Q9BV57 179 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 NMNAT2Q9BZQ4 307 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CDIP1Q9H305 208 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 SP140LQ9H930 580 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 LPAR2Q9HBW0 351 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 SLC25A19Q9HC21 320 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CYSLTR2Q9NS75 346 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 UFSP2Q9NUQ7 469 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 TBCCD1Q9NVR7 557 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 CLN6Q9NWW5 311 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 UBAP1Q9NZ09 502 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 AASSQ9UDR5 926 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 PURGQ9UJV8 347 aaKnown RBP3.94□□□□□ -1.78
ATXN3-231ENST00000554994 COMMD3-BMI1R4GMX3 469 aa3.94□□□□□ -1.78
ATXN3-231ENST00000554994 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZAR1LA6NP61 321 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ANKRD30BLA7E2S9 258 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF878C9JN71 531 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 F5H5P2 479 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF561-AS1K7EIQ3 104 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 TGFAP01135 160 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 IGHV1-46P01743 117 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 APOC1P02654 83 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 PRB2P02812 416 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CSF3P09919 207 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 PSKH1P11801 424 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 IRF2P14316 349 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ANPEPP15144 967 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SLC25A16P16260 332 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SELEP16581 610 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CA6P23280 308 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SRP14P37108 136 aaKnown RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 NR4A2P43354 598 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ALDH3A2P51648 485 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CHN2P52757 468 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CDH15P55291 814 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF121P58317 390 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 GMFBP60983 142 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CXCR4P61073 352 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 HIST1H3AP68431 136 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 IL5RAQ01344 420 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF92Q03936 586 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 GK2Q14410 553 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 PCGF3Q3KNV8 242 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SNAI3Q3KNW1 292 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SPRNQ5BIV9 151 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 GLYATL3Q5SZD4 288 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 HIST2H3PS2Q5TEC6 136 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 LINC01590Q5TEZ4 76 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SLX4IPQ5VYV7 408 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 DRAM2Q6UX65 266 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 KCTD8Q6ZWB6 473 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 HIST2H3AQ71DI3 136 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SLC35F2Q8IXU6 374 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 TIGD4Q8IY51 512 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF786Q8N393 782 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 DEFB108BQ8NET1 73 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 OR8G5Q8NG78 346 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 OR10AD1Q8NGE0 317 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 OR8S1Q8NH09 359 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 C10orf105Q8TEF2 133 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 NTN5Q8WTR8 489 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ITLN1Q8WWA0 313 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 PIGCQ92535 297 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 RAB1CQ92928 201 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 RFKQ969G6 155 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 YIPF5Q969M3 257 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SGK3Q96BR1 496 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 RBMXL1Q96E39 390 aaKnown RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ELMOD3Q96FG2 381 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 TIMD4Q96H15 378 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 HIST1H2AAQ96QV6 131 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 AMELYQ99218 206 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CNN2Q99439 309 aaKnown RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 MROQ9BYG7 248 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 YIPF3Q9GZM5 350 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 GABARAPL1Q9H0R8 117 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 OR10A2Q9H208 303 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 TOR3AQ9H497 397 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 SAP30LQ9HAJ7 183 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 AMBNQ9NP70 447 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-231ENST00000554994 NKIRAS2Q9NYR9 191 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 ZDHHC8Q9ULC8 765 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 PPP1R3CQ9UQK1 317 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 CACNG2Q9Y698 323 aa3.93□□□□□ -1.78
ATXN3-231ENST00000554994 TENM3Q9P273 2699 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms