RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PRPS1P60891 318 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 AP1S1P61966 158 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 KCNJ2P63252 427 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 TNFRSF17Q02223 184 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PSG7Q13046 419 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 DOC2AQ14183 400 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 CAPRIN1Q14444 709 aaKnown RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 DUSP7Q16829 419 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 BCL7AQ4VC05 210 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 C2orf83Q53S99 150 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PAGE3Q5JUK9 113 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 C1orf100Q5SVJ3 147 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OR52E8Q6IFG1 317 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SLC25A25Q6KCM7 469 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 DCUN1D2Q6PH85 259 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 Q6ZN92 141 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 RNF165Q6ZSG1 346 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 UTS2BQ765I0 119 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 ABHD13Q7L211 337 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 NDUFAF7Q7L592 441 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 GLT6D1Q7Z4J2 308 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PAQR7Q86WK9 346 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SLC13A5Q86YT5 568 aaPredicted RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 C12orf56Q8IXR9 622 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 RDH10Q8IZV5 341 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 LRRC75A-AS1Q8N1F1 130 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 NKAPP1Q8N9T2 125 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 C20orf203Q8NBC4 194 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 ACBD4Q8NC06 268 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 MDS2Q8NDY4 140 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OR5T3Q8NGG3 340 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OR52H1Q8NGJ2 320 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 RAB3IL1Q8TBN0 382 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 MAGEE2Q8TD90 523 aaPredicted RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PHF10Q8WUB8 498 aaKnown RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 RNF138Q8WVD3 245 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 UFD1Q92890 307 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 UCN3Q969E3 161 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 CMTM7Q96FZ5 175 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 TIMD4Q96H15 378 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SLC35E1Q96K37 410 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 WFIKKN1Q96NZ8 548 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PEBP4Q96S96 227 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 ZBTB18Q99592 522 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 COPS8Q99627 209 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SELENOSQ9BQE4 189 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 LLPHQ9BRT6 129 aaKnown RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SNRNP25Q9BV90 132 aaKnown RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 C20orf85Q9H1P6 137 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 LRRC19Q9H756 370 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 EURLQ9NYK6 297 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 RPS6KB2Q9UBS0 482 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 ARL5AQ9Y689 179 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 BIRC6Q9NR09 4857 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TRGV5A0A0B4J1U4 118 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 A0A0J9YY10 115 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TRBV11-1A0A0K0K1C0 115 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 GLYATL1P3A0A0U1RQE8 302 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 A0A1W2PP18 115 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 SNTNA6NMZ2 147 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DEFB108AA8MXU0 73 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TRIM49D1C9J1S8 452 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 E9PBE3 544 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 KLRC4-KLRK1H3BQV0 150 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 PSMD11O00231 422 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 CDC7O00311 574 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 HSD17B6O14756 317 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 NBR2O15453 112 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TIMM8AO60220 97 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF861PO60384 105 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 KLHL41O60662 606 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 FCMRO60667 390 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 B4GALT2O60909 372 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 OR2J2O76002 312 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 MYO1DO94832 1006 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ANXA5P08758 320 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 SYT1P21579 422 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 IL12AP29459 219 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 VDAC2P45880 294 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 NDUFA8P51970 172 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DLX1P56177 255 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 TAS2R19P59542 299 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DYNLT1P63172 113 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 BTG2P78543 158 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 CDK16Q00536 496 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 OGDHQ02218 1023 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF763Q0D2J5 394 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DAZ2Q13117 558 aaKnown RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 OR5I1Q13606 314 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ZMYND11Q15326 602 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 STK11Q15831 433 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ATP6AP1Q15904 470 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 NNATQ16517 81 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 CCSMST1Q4G0I0 132 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 ZCWPW2Q504Y3 356 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 CASC10Q5T4H9 136 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 C1orf185Q5T7R7 199 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 WDR59Q6PJI9 974 aa1.02□□□□□ -2.25
PRPF39-208ENST00000554785 CENPQQ7L2Z9 268 aaPredicted RBP1.02□□□□□ -2.25
PRPF39-208ENST00000554785 DHDDSQ86SQ9 333 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms