RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 C22orf15Q8WYQ4 148 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 GCDHQ92947 438 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-215ENST00000554656 TIMD4Q96H15 378 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 KCNN2Q9H2S1 579 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 EMC7Q9NPA0 242 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 POLE4Q9NR33 117 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 EIF3KQ9UBQ5 218 aaKnown RBP8.91□□□□□ -0.98
SHMT2-215ENST00000554656 COPS3Q9UNS2 423 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 A3GALT2U3KPV4 340 aa8.91□□□□□ -0.98
SHMT2-215ENST00000554656 DOCK11Q5JSL3 2073 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 A0A1W2PPL8 197 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 PLSCR5A0PG75 271 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 ISPDA4D126 451 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 TRIM77I1YAP6 450 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 J3QLW9 94 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF593O00488 134 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF254O75437 659 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SERPINA3P01011 423 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 HLA-DQA2P01906 255 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 KRT8P05787 483 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF19P17023 458 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 CELP19835 753 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 MSR1P21757 451 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SERPINB10P48595 397 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 OR12D2P58182 307 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SEC61A1P61619 476 aaKnown RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 LSM6P62312 80 aaKnown RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 UBA52P62987 128 aaKnown RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 LSAMPQ13449 338 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SPCS2Q15005 226 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 CDK5R1Q15078 307 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 DGUOKQ16854 277 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 AWAT1Q58HT5 328 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 KLF17Q5JT82 389 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 FDX2Q6P4F2 183 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 LYPD4Q6UWN0 246 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SSX6Q7RTT6 188 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 ZNF679Q8IYX0 411 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 MS4A15Q8N5U1 240 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 NANPQ8TBE9 248 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 DYNC2LI1Q8TCX1 351 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 PHYHIPQ92561 330 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 RPL3LQ92901 407 aaKnown RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SMIM19Q96E16 107 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 PELI1Q96FA3 418 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 C4orf45Q96LM5 186 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 C1orf147Q96MC9 270 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 OR8B4Q96RC9 309 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 SUCNR1Q9BXA5 334 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 OR51E2Q9H255 320 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 RERGLQ9H628 205 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 C7orf69Q9H7B7 122 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 ISG20L2Q9H9L3 353 aaKnown RBP8.9□□□□□ -0.98
SHMT2-215ENST00000554656 MMP26Q9NRE1 261 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 GSTK1Q9Y2Q3 226 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 TIMM10BQ9Y5J6 103 aa8.9□□□□□ -0.98
SHMT2-215ENST00000554656 F5H0A9 414 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 TRAPPC2LH3BP13 241 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 TIMM8AO60220 97 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 GPX5O75715 221 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 ABHD16AO95870 558 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 GATA3P23771 443 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 DCTDP32321 178 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 GUCA1AP43080 201 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 VBP1P61758 197 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 TNFAIP6P98066 277 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 TP53I3Q53FA7 332 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 BPIFB2Q8N4F0 458 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 TEX29Q8N6K0 151 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF283Q8N7M2 679 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 C3orf56Q8N813 242 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 SLC7A6Q92536 515 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 THRSPQ92748 146 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 CHCHD6Q9BRQ6 235 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 WACQ9BTA9 647 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 C1QTNF5Q9BXJ0 243 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 EGLN1Q9GZT9 426 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 DCSTAMPQ9H295 470 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 NIPAL2Q9H841 368 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 EXOSC4Q9NPD3 245 aaKnown RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 CYSLTR2Q9NS75 346 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM106BQ9NUM4 274 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 CCDC59Q9P031 241 aaKnown RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 CGGBP1Q9UFW8 167 aaPredicted RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 MRM2Q9UI43 246 aaKnown RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 PURGQ9UJV8 347 aaKnown RBP8.89□□□□□ -0.99
SHMT2-215ENST00000554656 ZDHHC8Q9ULC8 765 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 STARD10Q9Y365 291 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 PPIAL4AQ9Y536 164 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 NPTNQ9Y639 398 aa8.89□□□□□ -0.99
SHMT2-215ENST00000554656 PPIAL4EA0A075B759 164 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 PPIAL4CA0A0B4J2A2 164 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 LOC100506127A0A0U1RQW1 187 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 PPIAL4DF5H284 164 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 DOK2O60496 412 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 SC5DO75845 299 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 IL1AP01583 271 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 SPARCP09486 303 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 PPIAL4FP0DN26 164 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 COX5BP10606 129 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms