RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	PCK2	Q16822	640 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMEM176B	Q3YBM2	270 aa	Predicted RBP	4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ACSM3	Q53FZ2	586 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	YIF1B	Q5BJH7	314 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TEX30	Q5JUR7	227 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DCAF10	Q5QP82	559 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	THEM4	Q5T1C6	240 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LIPN	Q5VXI9	398 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	HBM	Q6B0K9	141 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMPPE	Q6ZT21	453 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CEACAM19	Q7Z692	300 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	NR2C2AP	Q86WQ0	139 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMPRSS12	Q86WS5	348 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PRIMA1	Q86XR5	153 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LAX1	Q8IWV1	398 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MINDY2	Q8NBR6	621 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SLC26A10	Q8NG04	563 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR5M1	Q8NGP8	315 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ACOT12	Q8WYK0	555 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	THOC3	Q96J01	351 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CEP19	Q96LK0	163 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OXGR1	Q96P68	337 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PIGQ	Q9BRB3	760 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TTYH2	Q9BSA4	534 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CCDC32	Q9BV29	185 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MRPL13	Q9BYD1	178 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MRO	Q9BYG7	248 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SLA2	Q9H6Q3	261 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMEM185B	Q9H7F4	350 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MRPL22	Q9NWU5	206 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	STMN3	Q9NZ72	180 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	KLHL9	Q9P2J3	617 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MRM2	Q9UI43	246 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	KCNG2	Q9UJ96	466 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DKKL1	Q9UK85	242 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RNF150	Q9ULK6	438 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CELSR3	Q9NYQ7	3312 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DOCK7	Q96N67	2140 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TNRC6A	Q8NDV7	1962 aa	Known RBP	4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	LOC400499	M0QZD8	3231 aa		4.1	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PTPRZ1	P23471	2315 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMEM212	A6NML5	194 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZNF879	B4DU55	563 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574		G3V3Y1	287 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SPRY3	O43610	288 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	AQP8	O94778	261 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	VAMP5	O95183	116 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	IGHG1	P01857	330 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PGA4	P0DJD7	388 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PGA3	P0DJD8	388 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR8G3P	P0DMU2	310 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PSKH1	P11801	424 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	NR2C1	P13056	603 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZNF43	P17038	809 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TCEA1	P23193	301 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PTBP1	P26599	531 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MAPK3	P27361	379 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SHC1	P29353	583 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SSTR2	P30874	369 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RPS27	P42677	84 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DNASE1L1	P49184	302 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	BID	P55957	195 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR2B6	P58173	313 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	NANOS3	P60323	173 aa	Known RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PPP3R1	P63098	170 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	FMOD	Q06828	376 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RASGEF1B	Q0VAM2	473 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OXA1L	Q15070	435 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ETFDH	Q16134	617 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	HIST3H3	Q16695	136 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	KRTAP15-1	Q3LI76	137 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	FAM27D1	Q5T7N8	215 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RAET1L	Q5VY80	246 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	TMEM225	Q6GV28	225 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	METAP1D	Q6UB28	335 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	UNQ9370/PRO34162	Q6UXP9	181 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ASB18	Q6ZVZ8	466 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	FAM219A	Q8IW50	185 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ZNF679	Q8IYX0	411 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	CENPS	Q8N2Z9	138 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	YIPF7	Q8N8F6	280 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	DEFB124	Q8NES8	71 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR6X1	Q8NH79	312 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR5AK2	Q8NH90	309 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	THEM6	Q8WUY1	208 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	THRSP	Q92748	146 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	SLC25A44	Q96H78	314 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	JSRP1	Q96MG2	331 aa	Predicted RBP	4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RBP7	Q96R05	134 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	OR8B4	Q96RC9	309 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ATF6B	Q99941	703 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	PDCD1LG2	Q9BQ51	273 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	WNT5B	Q9H1J7	359 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MIXL1	Q9H2W2	232 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	ABCB9	Q9NP78	766 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	MED29	Q9NX70	200 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	C1RL	Q9NZP8	487 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	IKZF2	Q9UKS7	526 aa		4.09	□□□□□ -1.75
PPP4R3A-204	ENST00000554574	RASD1	Q9Y272	281 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms