RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZNF19P17023 458 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 IGFBP2P18065 325 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ANOS1P23352 680 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 PSMB10P40306 273 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 HTR5AP47898 357 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF83P51522 516 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 IDH3GP51553 393 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 PRKXP51817 358 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ACTA2P62736 377 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 GRB2P62993 217 aaKnown RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ACTG2P63267 376 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 EMX1Q04741 257 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 MFGE8Q08431 387 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 TBCEQ15813 527 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 C1QTNF12Q5T7M4 302 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 LIPNQ5VXI9 398 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 XAF1Q6GPH4 301 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 KCTD18Q6PI47 426 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 TMPRSS11AQ6ZMR5 421 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 PLEKHG7Q6ZR37 379 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 KCTD8Q6ZWB6 473 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 KRT77Q7Z794 578 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 NAA40Q86UY6 237 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 SYS1Q8N2H4 156 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 PAQR4Q8N4S7 273 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 YIPF7Q8N8F6 280 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 LINC01560Q8TB33 94 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 MUCL1Q96DR8 90 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 DAZAP1Q96EP5 407 aaKnown RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 PELI1Q96FA3 418 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ZC3HAV1LQ96H79 300 aaKnown RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 POM121L2Q96KW2 1035 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ACOT13Q9NPJ3 140 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ACOXLQ9NUZ1 547 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 CHCHD3Q9NX63 227 aaKnown RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ATPIF1Q9UII2 106 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 GNG8Q9UK08 70 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 IKZF2Q9UKS7 526 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ERGIC3Q9Y282 383 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 LRBAP50851 2863 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 IQCMA0A1B0GVH7 501 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 DPRXA6NFQ7 191 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 F5H5K5 113 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 M0R1B8 84 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MYL12BO14950 172 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 PROP1O75360 226 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 RPP14O95059 124 aaKnown RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 CCL2P13500 99 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ATP6V1B1P15313 513 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 STOMP27105 288 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 DCTDP32321 178 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 APLNRP35414 380 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 GTF2A1P52655 376 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 RIDAP52758 137 aaKnown RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 WNT4P56705 351 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF121P58317 390 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 GALK2Q01415 458 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ECH1Q13011 328 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 SPHARQ15513 63 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 TAF13Q15543 124 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 UBE2UQ5VVX9 321 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 CRYBG3Q68DQ2 2970 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 COLCA1Q6ZS62 124 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 PRSS45Q7RTY3 260 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 KLBQ86Z14 1044 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 EGFL6Q8IUX8 553 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ZFP41Q8N8Y5 198 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ACBD4Q8NC06 268 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 SLC30A7Q8NEW0 376 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 RPS4Y2Q8TD47 263 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 SSC4DQ8WTU2 575 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 RORBQ92753 470 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 TRMT61AQ96FX7 289 aaKnown RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MRPL48Q96GC5 212 aaKnown RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 COG8Q96MW5 612 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MED18Q9BUE0 208 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ELOVL1Q9BW60 279 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MND1Q9BWT6 205 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MROQ9BYG7 248 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MRPS26Q9BYN8 205 aaKnown RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 NIPAL2Q9H841 368 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 MOV10Q9HCE1 1003 aaKnown RBP5.4□□□□□ -1.54
SCFD1-212ENST00000554486 FAM206AQ9NX38 181 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 BABAM2Q9NXR7 383 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF319Q9P2F9 582 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 GRIP1Q9Y3R0 1128 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 SNX5Q9Y5X3 404 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 R4GMQ9 66 aa5.4□□□□□ -1.54
SCFD1-212ENST00000554486 IGHV2OR16-5A0A0B4J2B6 119 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TMEM269A0A1B0GVZ9 245 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 C5orf49A4QMS7 147 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TUBAL3A6NHL2 446 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 OR4C45A6NMZ5 311 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 B9A039 149 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 M0R135 149 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 OGG1O15527 345 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 CLDN1O95832 211 aa5.39□□□□□ -1.55
SCFD1-212ENST00000554486 TFAP2AP05549 437 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms