RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CCL4L1Q8NHW4 92 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 WDR36Q8NI36 951 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 GNPDA2Q8TDQ7 276 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 SSMEM1Q8WWF3 244 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 CACNG8Q8WXS5 425 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 ST8SIA1Q92185 356 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 SMPDL3BQ92485 455 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 SENP5Q96HI0 755 aaPredicted RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 Q96MT0 163 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 VSTM2LQ96N03 204 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF578Q96N58 590 aaPredicted RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 TSSK2Q96PF2 358 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 OR2A5Q96R48 311 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 TMEM246Q9BRR3 403 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 ANGPTL4Q9BY76 406 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 BARHL1Q9BZE3 327 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 PLA2G12AQ9BZM1 189 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 RACGAP1Q9H0H5 632 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 OR51V1Q9H2C8 321 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 METTL8Q9H825 291 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 FGF20Q9NP95 211 aaPredicted RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 POLE4Q9NR33 117 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 UFSP2Q9NUQ7 469 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 LYARQ9NX58 379 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 CLEC5AQ9NY25 188 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 TVP23BQ9NYZ1 205 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 NLGN3Q9NZ94 848 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 PTTG3PQ9NZH4 202 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 NPAP1Q9NZP6 1156 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 DIMT1Q9UNQ2 313 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 RPL36Q9Y3U8 105 aaKnown RBP4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 WDR45Q9Y484 360 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 PPIAL4AQ9Y536 164 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 COLEC10Q9Y6Z7 277 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 U3KQA8 63 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 AHCTF1Q8WYP5 2266 aa4.48□□□□□ -1.69
MTHFD1-206ENST00000554353 A0A0A6YYH2 397 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 SPTY2D1-AS1A0A0U1RR47 76 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ISPDA4D126 451 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 A6NJ64 397 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 SAGE2PA6NJ88 616 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 H3BN98 237 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 AQP9O43315 295 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 CTSVO60911 334 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 KCNK2O95069 426 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 LYPD3O95274 346 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 HSMCR30P0CW71 290 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ACP2P11117 423 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 GP9P14770 177 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 SPNP16150 400 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 UGT2B7P16662 529 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 RPS4Y1P22090 263 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 PSMB6P28072 239 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 MPIP34949 423 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 SOX3P41225 446 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 MAP3K8P41279 467 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TNFSF10P50591 281 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 MMP15P51511 669 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 FUT6P51993 359 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF136P52737 540 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 RPS15AP62244 130 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF45Q02386 682 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 PAX5Q02548 391 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TSPAN31Q12999 210 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 MLLT11Q13015 90 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TRAM2Q15035 370 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 SPHARQ15513 63 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 MICBQ29980 383 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ISXQ2M1V0 245 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF181Q2M3W8 571 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 DEFB133Q30KQ1 61 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 LIPKQ5VXJ0 399 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 THOC7Q6I9Y2 204 aaKnown RBP4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 OR2A2Q6IF42 318 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 FAM166AQ6J272 317 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 BHLHB9Q6PI77 547 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 CASP12Q6UXS9 341 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 GDPGP1Q6ZNW5 385 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 RASSF6Q6ZTQ3 369 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 PARGQ86W56 976 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 SLC34A3Q8N130 599 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TMEM123Q8N131 208 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 OR2L13Q8N349 312 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF485Q8NCK3 441 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 OR51L1Q8NGJ5 315 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 OR1L4Q8NGR5 311 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 OR4Q3Q8NH05 313 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 MARCH1Q8TCQ1 289 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 LMX1AQ8TE12 382 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 LCN9Q8WX39 176 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 NR4A3Q92570 626 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 LHX4Q969G2 390 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TSACCQ96A04 125 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 RAB39BQ96DA2 213 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TGM7Q96PF1 710 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ZNF649Q9BS31 505 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TTYH2Q9BSA4 534 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 PRRG4Q9BZD6 226 aa4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 TCEAL2Q9H3H9 227 aaPredicted RBP4.47□□□□□ -1.69
MTHFD1-206ENST00000554353 ANKRD19PQ9H560 264 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms