RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TMEM239Q8WW34 195 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PHYHIPQ92561 330 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CDS1Q92903 461 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 APH1AQ96BI3 265 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 RNFT2Q96EX2 444 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 NPAS1Q99742 590 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 GAL3ST1Q99999 423 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SOSTQ9BQB4 213 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PRSS27Q9BQR3 290 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF649Q9BS31 505 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 C1orf43Q9BWL3 253 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 TBL1XR1Q9BZK7 514 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SLC19A3Q9BZV2 496 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 C6orf62Q9GZU0 229 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-226ENST00000554350 KCNN2Q9H2S1 579 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 TMEM27Q9HBJ8 222 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SLC17A5Q9NRA2 495 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CMC2Q9NRP2 79 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-226ENST00000554350 MAT2BQ9NZL9 334 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 RABL2AQ9UBK7 228 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PRODH2Q9UF12 536 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CLEC2DQ9UHP7 191 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 PAIP2BQ9ULR5 123 aaKnown RBP4.73□□□□□ -1.65
ATXN3-226ENST00000554350 RABL2BQ9UNT1 228 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 SLC35A3Q9Y2D2 325 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 CMAHPQ9Y471 501 aa4.73□□□□□ -1.65
ATXN3-226ENST00000554350 A0A0B4J2E0 115 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 IGHV1-18A0A0C4DH31 117 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 A0A1B0GX12 115 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 OR6C65A6NJZ3 312 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 CPSF4LA6NMK7 179 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 NPIPB9F8W1W9 429 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 H0YIZ8 118 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 H0YL77 283 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 M0R233 179 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 BHLHE40O14503 412 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 CTDSP2O14595 271 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 TO15178 435 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 IDH3BO43837 385 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 TSPAN2O60636 221 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 JTBO76095 146 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ZNF432O94892 652 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 IGHV2-5P01817 119 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 HLA-DQB1P01920 261 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 THY1P04216 161 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 IGFBP1P08833 259 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 IGHV4-38-2P0DP08 117 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 S1PR1P21453 382 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 PAICSP22234 425 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SHC1P29353 583 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SDC2P34741 201 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 TGFBR1P36897 503 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ETV1P50549 477 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 PNLIPRP2P54317 469 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 FOXG1P55316 489 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ACTC1P68032 377 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ACTA1P68133 377 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SCN1BQ07699 218 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ASAH1Q13510 395 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 GALEQ14376 348 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 OR1Q1Q15612 314 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 LTB4RQ15722 352 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 DEFB112Q30KQ8 113 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 NSUN5P1Q3KNT7 163 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 TRMT12Q53H54 448 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 PLAC9Q5JTB6 97 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 DDI2Q5TDH0 399 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 HACD4Q5VWC8 232 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 MZT2AQ6P582 158 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 GDPD3Q7L5L3 318 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 RNF144BQ7Z419 303 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 NKAIN4Q8IVV8 208 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 NRMQ8IXM6 262 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 LYG1Q8N1E2 194 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 GTPBP8Q8N3Z3 284 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 MS4A15Q8N5U1 240 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ACBD7Q8N6N7 88 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 COX18Q8N8Q8 333 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 OR4F15Q8NGB8 312 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 OR4Q3Q8NH05 313 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 LIPHQ8WWY8 451 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ITFG2Q969R8 447 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 MRPL48Q96GC5 212 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 CMTM3Q96MX0 182 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SDHCQ99643 169 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 KATNB1Q9BVA0 655 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 BARHL1Q9BZE3 327 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 RTN4RQ9BZR6 473 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 SRRQ9GZT4 340 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 HOXD1Q9GZZ0 328 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 OR52D1Q9H346 318 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 EGLN3Q9H6Z9 239 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ANKRA2Q9H9E1 313 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 C12orf10Q9HB07 376 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 EXOSC4Q9NPD3 245 aaKnown RBP4.72□□□□□ -1.65
ATXN3-226ENST00000554350 ABCB10Q9NRK6 738 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 BABAM2Q9NXR7 383 aa4.72□□□□□ -1.65
ATXN3-226ENST00000554350 FLRT3Q9NZU0 649 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms