RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 BORCS7-ASMTA0A0B4J1R7 106 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 A0A1W2PR48 441 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CDC14CA4D256 554 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 PRRT4C9JH25 899 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CATP04040 527 aaKnown RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 CTSBP07858 339 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CTXN2P0C2S0 81 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 SLC6A6P31641 620 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ALDH3B1P43353 468 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 MAPK8P45983 427 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 GNB2P62879 340 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ZNF260Q3ZCT1 412 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 C10orf120Q5SQS8 335 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ZNF66Q6ZN08 573 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TMEM182Q6ZP80 229 aaPredicted RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 TMPRSS7Q7RTY8 843 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 EXD3Q8N9H8 876 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 OR2V1Q8NHB1 315 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ADAMTS15Q8TE58 950 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ZNF480Q8WV37 535 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 TOMM40LQ969M1 308 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 MOB3AQ96BX8 217 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 SDSLQ96GA7 329 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 HHIPL1Q96JK4 782 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 OR8B4Q96RC9 309 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 CABLES2Q9BTV7 478 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 ELL3Q9HB65 397 aaPredicted RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 RCL1Q9Y2P8 373 aaKnown RBP8.47□□□□□ -1.05
SIX4-202ENST00000554079 KLHDC2Q9Y2U9 406 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 COX11Q9Y6N1 276 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 SCN2AQ99250 2005 aa8.47□□□□□ -1.05
SIX4-202ENST00000554079 A0A1W2PS29 197 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 NPIPB15A6NHN6 443 aaPredicted RBP8.46□□□□□ -1.05
SIX4-202ENST00000554079 AHRRA9YTQ3 701 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 SCDO00767 359 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 TMPRSS11DO60235 418 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 IFNA6P05013 189 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 PFN1P07737 140 aaKnown RBP8.46□□□□□ -1.05
SIX4-202ENST00000554079 SERPINA4P29622 427 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 CAPZBP47756 277 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 RHOAP61586 193 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 TGM3Q08188 693 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 FZD2Q14332 565 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 PRSS8Q16651 343 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 ACTL10Q5JWF8 245 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 TPTE2P1Q5T6R2 138 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 FAM90A2PQ658T7 463 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 C16orf59Q7L2K0 433 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 ADGRE4PQ86SQ3 457 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 RTN4RL1Q86UN2 441 aaPredicted RBP8.46□□□□□ -1.05
SIX4-202ENST00000554079 APOBEC3FQ8IUX4 373 aaKnown RBP8.46□□□□□ -1.05
SIX4-202ENST00000554079 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 C10orf53Q8N6V4 93 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 OR2AJ1Q8NGZ0 328 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 TNFRSF13CQ96RJ3 184 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 NUDT9Q9BW91 350 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 MS4A8Q9BY19 250 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 MAGT1Q9H0U3 335 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 ATG2AQ2TAZ0 1938 aa8.46□□□□□ -1.05
SIX4-202ENST00000554079 HEATR5BQ9P2D3 2071 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 CLEC18AA5D8T8 446 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 F6UZH7 168 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 H3BSH0 61 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 MMP23AO75900 390 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 CKMP06732 381 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 OR4Q2P0C623 313 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 FPR2P25090 351 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 AK4P27144 223 aaPredicted RBP8.46□□□□□ -1.06
SIX4-202ENST00000554079 CLDN2P57739 230 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 PNRC1Q12796 327 aaPredicted RBP8.46□□□□□ -1.06
SIX4-202ENST00000554079 IL24Q13007 206 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 ENDOGQ14249 297 aaKnown RBP8.46□□□□□ -1.06
SIX4-202ENST00000554079 NFATC4Q14934 902 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 MMDQ15546 238 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 FBLN7Q53RD9 439 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 FAM220AQ7Z4H9 259 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 ZNF619Q8N2I2 560 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 CLEC18CQ8NCF0 446 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 RCBTB1Q8NDN9 531 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 OR10G4Q8NGN3 311 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 FGGYQ96C11 551 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 ULBP3Q9BZM4 244 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 ADAP2Q9NPF8 381 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 AHSPQ9NZD4 102 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 HSPB7Q9UBY9 170 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 TUBD1Q9UJT1 453 aa8.46□□□□□ -1.06
SIX4-202ENST00000554079 ABT1Q9ULW3 272 aaKnown RBP8.46□□□□□ -1.06
SIX4-202ENST00000554079 A0A1B0GVT2 93 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CTSVO60911 334 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 MTX2O75431 263 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 VAMP5O95183 116 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 KLF8O95600 359 aaPredicted RBP8.45□□□□□ -1.06
SIX4-202ENST00000554079 TACSTD2P09758 323 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 GZMHP20718 246 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 EPHA8P29322 1005 aaPredicted RBP8.45□□□□□ -1.06
SIX4-202ENST00000554079 RPL4P36578 427 aaKnown RBP8.45□□□□□ -1.06
SIX4-202ENST00000554079 NCBP2P52298 156 aaKnown RBP eCLIP8.45□□□□□ -1.06
SIX4-202ENST00000554079 RPS20P60866 119 aaKnown RBP8.45□□□□□ -1.06
SIX4-202ENST00000554079 HIST1H3AP68431 136 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms