RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 C19orf18Q8NEA5 215 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 OR10AD1Q8NGE0 317 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 OR4A15Q8NGL6 344 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 OR5J2Q8NH18 312 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 LINC00476Q8WZB0 136 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MALSU1Q96EH3 234 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SAT2Q96F10 170 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 PPP3R2Q96LZ3 170 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 RBP7Q96R05 134 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 TM2D3Q9BRN9 247 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 HCAR1Q9BXC0 346 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SLC38A1Q9H2H9 487 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 CTSZQ9UBR2 303 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 MARCOQ9UEW3 520 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 HAO1Q9UJM8 370 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 TCF19Q9Y242 345 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 SIRT4Q9Y6E7 314 aaPredicted RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 HYDINQ4G0P3 5121 aa4.12□□□□□ -1.75
CKAP4-203ENST00000553039 DYNC2H1Q8NCM8 4307 aaKnown RBP4.12□□□□□ -1.75
CKAP4-203ENST00000553039 A0A1W2PRG6 482 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 A6NDX4 124 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 C12orf71A8MTZ7 269 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 SEC14L6B5MCN3 397 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 HMGN4O00479 90 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 AZIN1O14977 448 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 FAM20BO75063 409 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 CPSF4O95639 269 aaKnown RBP4.11□□□□□ -1.75
CKAP4-203ENST00000553039 CST2P09228 141 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 LINC00032P0C843 101 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 PGA4P0DJD7 388 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 PGA3P0DJD8 388 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 MUC1P15941 1255 aaPredicted RBP4.11□□□□□ -1.75
CKAP4-203ENST00000553039 RPS4Y1P22090 263 aaKnown RBP4.11□□□□□ -1.75
CKAP4-203ENST00000553039 AZGP1P25311 298 aaKnown RBP4.11□□□□□ -1.75
CKAP4-203ENST00000553039 GGT2P36268 569 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 RAB13P51153 203 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 RAB25P57735 213 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 DNAJB13P59910 316 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 ERVK-25P63136 954 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 SELPLGQ14242 412 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 IL13RA2Q14627 380 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 NPTX1Q15818 432 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 HIST3H3Q16695 136 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF674Q2M3X9 581 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 ALG10BQ5I7T1 473 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 KRBOX4Q5JUW0 171 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 C10orf128Q5T292 105 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 CST9LP1Q5W188 147 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 FAM219BQ5XKK7 198 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 FAM91A1Q658Y4 838 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 OR2T2Q6IF00 324 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 FBXW12Q6X9E4 464 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 RNF165Q6ZSG1 346 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 TRPM8Q7Z2W7 1104 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 ANKRD46Q86W74 232 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 CLEC4FQ8N1N0 589 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 CLIP4Q8N3C7 705 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 PNKDQ8N490 385 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 OR9Q1Q8NGQ5 310 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 FNDC8Q8TC99 324 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 C2CD4CQ8TF44 421 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 MED30Q96HR3 178 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 P2RX4Q99571 388 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 ECSITQ9BQ95 431 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 DPCDQ9BVM2 203 aaPredicted RBP4.11□□□□□ -1.75
CKAP4-203ENST00000553039 NUF2Q9BZD4 464 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 WNT5BQ9H1J7 359 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 MEAF6Q9HAF1 191 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 TMEM27Q9HBJ8 222 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 UFSP2Q9NUQ7 469 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 VNN3Q9NY84 501 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 KIAA1456Q9P272 454 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 DNAJB9Q9UBS3 223 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 PRPF19Q9UMS4 504 aaKnown RBP4.11□□□□□ -1.75
CKAP4-203ENST00000553039 A4GNTQ9UNA3 340 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 RAP2CQ9Y3L5 183 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 DNAH9Q9NYC9 4486 aa4.11□□□□□ -1.75
CKAP4-203ENST00000553039 A0A0G2JPF8 293 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ZNF320A2RRD8 509 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 TRPC5OSA6NMA1 111 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 HNRNPCL2B2RXH8 293 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 HNRNPCL3B7ZW38 293 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 MCIDASD6RGH6 385 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 CCL24O00175 119 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 HDAC3O15379 428 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ITM2AO43736 263 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 CCDC22O60826 627 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 RHBDL1O75783 438 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 BGLAPP02818 100 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 HNRNPCL4P0DMR1 293 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 PRG2P13727 222 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 ACADSP16219 412 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 CD200P41217 278 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 RPL14P50914 215 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 CRISP3P54108 245 aa4.1□□□□□ -1.75
CKAP4-203ENST00000553039 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 RPL23AP62750 156 aaKnown RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 PRB3Q04118 309 aaPredicted RBP4.1□□□□□ -1.75
CKAP4-203ENST00000553039 FUT5Q11128 374 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms