RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 EIF3KQ9UBQ5 218 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 RPS6KB2Q9UBS0 482 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MIOXQ9UGB7 285 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 OR5V1Q9UGF6 321 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 IL19Q9UHD0 177 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ADAM18Q9Y3Q7 739 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 UGT2A1Q9Y4X1 527 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 GMEB1Q9Y692 573 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 A0A0B4J293 547 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF816-ZNF321PA0A0X1KG74 233 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 WI2-2373I1.2A0A1W2PRP0 233 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 C5orf49A4QMS7 147 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 C11orf98E9PRG8 122 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 C3orf84H3BNL1 204 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 P2RY10O00398 339 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 EBAG9O00559 213 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 SDHDO14521 159 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 RFXANKO14593 260 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 TYROBPO43914 113 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 FMO6PO60774 539 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 PAGE4O60829 102 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 SPAG7O75391 227 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 FCN3O75636 299 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 TRMUO75648 421 aaKnown RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 TGDSO95455 350 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 IGHV4-59P01825 116 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 IGHG1P01857 330 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 IL6P05231 212 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ASAH2BP0C7U1 165 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ADORA3P0DMS8 318 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF32P17041 273 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 CDAP32320 146 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 CFHR2P36980 270 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 PSMB10P40306 273 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 CRATP43155 626 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 GDI2P50395 445 aaKnown RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 RPL14P50914 215 aaKnown RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 PSMD7P51665 324 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 UGT2B15P54855 530 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ERVFC1-1P60608 527 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ABCE1P61221 599 aaKnown RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 GNB2P62879 340 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 MELKQ14680 651 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF74Q16587 644 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF181Q2M3W8 571 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF404Q494X3 552 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ARMC4Q5T2S8 1044 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 GPR157Q5UAW9 335 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 FAM27BQ5VT28 67 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 WDR25Q64LD2 544 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 SLC25A47Q6Q0C1 308 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 LYPD2Q6UXB3 125 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 UNQ6126/PRO20091Q6UXV3 157 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 MSANTD1Q6ZTZ1 278 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 FOXL2NBQ6ZUU3 175 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 RFPL4BQ6ZWI9 263 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZER1Q7Z7L7 766 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 IFT20Q8IY31 132 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZDHHC23Q8IYP9 409 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 MUC20Q8N307 709 aaPredicted RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 C10orf111Q8N326 155 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 LRRC18Q8N456 261 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 EIF1ADQ8N9N8 165 aaKnown RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ICA1LQ8NDH6 482 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 AKR7LQ8NHP1 331 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 BBS10Q8TAM1 723 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ITLN1Q8WWA0 313 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 LIPHQ8WWY8 451 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 GTF2H4Q92759 462 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 MAL2Q969L2 176 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 TMEM18Q96B42 140 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 CMBLQ96DG6 245 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 PLEKHA8Q96JA3 519 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 C4orf45Q96LM5 186 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 PPP1R36Q96LQ0 422 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF570Q96NI8 536 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF426Q9BUY5 554 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 SLC19A3Q9BZV2 496 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 OR2H1Q9GZK4 316 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 SIRPDQ9H106 197 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 VCX3BQ9H321 246 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 MAP6D1Q9H9H5 199 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 NANOGQ9H9S0 305 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 GRPEL1Q9HAV7 217 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 TMEM27Q9HBJ8 222 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 SLCO1B3Q9NPD5 702 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 ACOXLQ9NUZ1 547 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 LGALS13Q9UHV8 139 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 PPP1R3CQ9UQK1 317 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 STARD10Q9Y365 291 aa2.89□□□□□ -1.95
LIMA1-206ENST00000550611 LSM4Q9Y4Z0 139 aaKnown RBP2.89□□□□□ -1.95
LIMA1-206ENST00000550611 IGHV1-69DA0A0B4J2H0 117 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 A0A0U1RQK1 487 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 A0A1W2PRQ8 180 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 SMIM23A6NLE4 172 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF879B4DU55 563 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 RNASEK-C17orf49H0YIS7 233 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 PHYHO14832 338 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 SURF4O15260 269 aa2.88□□□□□ -1.95
LIMA1-206ENST00000550611 BIRC5O15392 142 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms