RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TMIGD2Q96BF3 282 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 MED30Q96HR3 178 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 RNF170Q96K19 258 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 TBX15Q96SF7 602 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 BEX1Q9HBH7 125 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 SLC25A19Q9HC21 320 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 BRD7Q9NPI1 651 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ACOXLQ9NUZ1 547 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 HAO2Q9NYQ3 351 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 DNAJB11Q9UBS4 358 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 RPUSD1Q9UJJ7 312 aaKnown RBP9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 A0A0U1RQV5 110 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 TCRBV3S1A0A5B6 114 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 NKX6-3A6NJ46 265 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF850A8MQ14 1090 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 DYNC1I1O14576 645 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 GSC2O15499 205 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 SELENOFO60613 162 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 FKBP6O75344 327 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 DNAJC8O75937 253 aaPredicted RBP9□□□□□ -0.97
VTI1BP3-201ENST00000550220 IGHV1-69P01742 117 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 SFTPBP07988 381 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ANOS1P23352 680 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 TGM4P49221 684 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ARF6P62330 175 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 PRDX4Q13162 271 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 SNAPC1Q16533 368 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZBTB37Q5TC79 503 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 METAP1DQ6UB28 335 aaPredicted RBP9□□□□□ -0.97
VTI1BP3-201ENST00000550220 C1orf122Q6ZSJ8 110 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 KCTD8Q6ZWB6 473 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 TMEM179BQ7Z7N9 219 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 WDR86Q86TI4 376 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZDHHC23Q8IYP9 409 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 SCCPDHQ8NBX0 429 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 LY6G5BQ8NDX9 201 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF671Q8TAW3 534 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAM81AQ8TBF8 368 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 PIGCQ92535 297 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 AMELYQ99218 206 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 MNTQ99583 582 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 TEAD3Q99594 435 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 CCL13Q99616 98 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 SIRPDQ9H106 197 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 SMURF1Q9HCE7 757 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 PAPOLBQ9NRJ5 636 aaKnown RBP9□□□□□ -0.97
VTI1BP3-201ENST00000550220 H2AFY2Q9P0M6 372 aaPredicted RBP9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF319Q9P2F9 582 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 ENOPH1Q9UHY7 261 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAM96BQ9Y3D0 163 aa9□□□□□ -0.97
VTI1BP3-201ENST00000550220 IGHV3OR15-7A0A075B7D8 119 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF816-ZNF321PA0A0X1KG74 233 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 TMEM269A0A1B0GVZ9 245 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 MTRF1O75570 445 aaKnown RBP8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 NDUFA7O95182 113 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 PRKACGP22612 351 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 SLC2A5P22732 501 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 EEF1B2P24534 225 aaKnown RBP8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 RASSF2P50749 326 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 CRISP1P54107 249 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 ESRRGP62508 458 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 GNG3P63215 75 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 CSNK2BP67870 215 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 ROM1Q03395 351 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 RIPPLY1Q0D2K3 151 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF829Q3KNS6 432 aaPredicted RBP8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 WDR38Q5JTN6 314 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 THAP5Q7Z6K1 395 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF679Q8IYX0 411 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 KIR3DL3Q8N743 410 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR8B12Q8NGG6 310 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 BCAS4Q8TDM0 211 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 LRTOMTQ8WZ04 291 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 DYRK2Q92630 601 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 LHX4Q969G2 390 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 RAB3IPQ96QF0 476 aaPredicted RBP8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 PKP2Q99959 881 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 RASSF4Q9H2L5 321 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 DPAGT1Q9H3H5 408 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 TVP23BQ9NYZ1 205 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 POMPQ9Y244 141 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 LRP12Q9Y561 859 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 TENM1Q9UKZ4 2725 aa8.99□□□□□ -0.97
VTI1BP3-201ENST00000550220 BTBD17A6NE02 478 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAM181BA6NEQ2 426 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR5B21A6NL26 309 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 KNG1P01042 644 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 MELTFP08582 738 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 POU4F2Q12837 409 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 APOFQ13790 326 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 BLMHQ13867 455 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 CEACAM21Q3KPI0 293 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 STUMQ69YW2 141 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAHD1Q6P587 224 aa8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 FIP1L1Q6UN15 594 aaKnown RBP8.98□□□□□ -0.97
VTI1BP3-201ENST00000550220 C17orf107Q6ZR85 190 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms