RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 HRASP01112 189 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 KRASP01116 189 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 GOLGA8HP0CJ92 632 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 INAFM2P0DMQ5 153 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 CD99P14209 185 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 NBL1P41271 181 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 PSMD8P48556 350 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 TGM4P49221 684 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 RPS15AP62244 130 aaKnown RBP1.27□□□□□ -2.21
CCDC38-206ENST00000548771 OR1Q1Q15612 314 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 HADHQ16836 314 aaKnown RBP1.27□□□□□ -2.21
CCDC38-206ENST00000548771 TMEM236Q5W0B7 351 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 TMEM53Q6P2H8 277 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 TMEM220Q6QAJ8 160 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 BZW1Q7L1Q6 419 aaKnown RBP1.27□□□□□ -2.21
CCDC38-206ENST00000548771 SLC30A8Q8IWU4 369 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 BBS5Q8N3I7 341 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 ASZ1Q8WWH4 475 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 KLF6Q99612 283 aaPredicted RBP1.27□□□□□ -2.21
CCDC38-206ENST00000548771 PDCD1LG2Q9BQ51 273 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 SFXN3Q9BWM7 321 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 PLEKHF2Q9H8W4 249 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 ASF1BQ9NVP2 202 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 MYEF2Q9P2K5 600 aaKnown RBP1.27□□□□□ -2.21
CCDC38-206ENST00000548771 SLC22A7Q9Y694 548 aa1.27□□□□□ -2.21
CCDC38-206ENST00000548771 NACADO15069 1562 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 LOC102724200A0A096LPH7 203 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 DNALI1O14645 258 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 MYL12BO14950 172 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 PSPHP1O15172 72 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 ERI3O43414 337 aaKnown RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 PTHP01270 115 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 IGHV1-46P01743 117 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 PRSS3P35030 304 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 OR1G1P47890 313 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 ACOT2P49753 483 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 ERFP50548 548 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 GZMMP51124 257 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 LRRC74AQ0VAA2 488 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 GABRA6Q16445 453 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 KLHL40Q2TBA0 621 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 HHATQ5VTY9 493 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 SMARCD3Q6STE5 483 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 METAP1DQ6UB28 335 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 PDPNQ86YL7 162 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 CCDC148Q8NFR7 591 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 OR1S1Q8NH92 325 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 PHOSPHO2Q8TCD6 241 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 SFXN5Q8TD22 340 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 TSEN15Q8WW01 171 aaKnown RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 RXFP2Q8WXD0 754 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 N4BP2L2Q92802 583 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 SNF8Q96H20 258 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 JSRP1Q96MG2 331 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 RDH12Q96NR8 316 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 SCGB3A2Q96PL1 93 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 ALS2CR12Q96Q35 445 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 PKMYT1Q99640 499 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 TBL1XR1Q9BZK7 514 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 TRIM45Q9H8W5 580 aaPredicted RBP1.26□□□□□ -2.21
CCDC38-206ENST00000548771 INIPQ9NRY2 104 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 RAB20Q9NX57 234 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 R4GN34 69 aa1.26□□□□□ -2.21
CCDC38-206ENST00000548771 RPRD2Q5VT52 1461 aaKnown RBP1.25□□□□□ -2.21
CCDC38-206ENST00000548771 CCL15-CCL14A0A0B4J2E2 113 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.25□□□□□ -2.21
CCDC38-206ENST00000548771 XRCC2O43543 280 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 CTNSO60931 367 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 UBCP0CG48 685 aaKnown RBP1.25□□□□□ -2.21
CCDC38-206ENST00000548771 GSTM3P21266 225 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 TGFBR2P37173 567 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 OR2B8PP59922 312 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ZNF33AQ06730 810 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 IDI1Q13907 227 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 MAPRE2Q15555 327 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 CCL15Q16663 113 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 BEX5Q5H9J7 111 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ZNF678Q5SXM1 525 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ZNF660Q6AZW8 331 aaPredicted RBP1.25□□□□□ -2.21
CCDC38-206ENST00000548771 PQLC3Q8N755 202 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 CMTM2Q8TAZ6 248 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 CA5BP1Q8WTZ4 195 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 APH1AQ96BI3 265 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 RCN3Q96D15 328 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 OTUB2Q96DC9 234 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 YIPF6Q96EC8 236 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 BPIFA3Q9BQP9 254 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 C11orf70Q9BRQ4 267 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 DUSP21Q9H596 190 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ELOVL6Q9H5J4 265 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 OR2S2Q9NQN1 319 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ZC4H2Q9NQZ6 224 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ZNF302Q9NR11 478 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 PARP11Q9NR21 331 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 NDRG2Q9UN36 371 aaKnown RBP1.25□□□□□ -2.21
CCDC38-206ENST00000548771 ZNF257Q9Y2Q1 563 aa1.25□□□□□ -2.21
CCDC38-206ENST00000548771 RRP15Q9Y3B9 282 aaKnown RBP1.25□□□□□ -2.21
CCDC38-206ENST00000548771 IGKV1-6A0A0C4DH72 117 aa1.24□□□□□ -2.21
CCDC38-206ENST00000548771 A0A0G2JMP0 313 aa1.24□□□□□ -2.21
CCDC38-206ENST00000548771 A0A0X1KG70 313 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms