RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 UBR5O95071 2799 aaPredicted RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 HELZP42694 1942 aaKnown RBP2.7□□□□□ -1.98
PTCH1-216ENST00000548379 CFAP46Q8IYW2 2715 aa2.7□□□□□ -1.98
PTCH1-216ENST00000548379 TRAV17A0A0B4J275 112 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 GLYATL1P3A0A0U1RQE8 302 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PINLYPA6NC86 204 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 MGAT4DA6NG13 374 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 GJE1A6NN92 205 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SLC31A2O15432 143 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 INSP01308 110 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 OR8G3PP0DMU2 310 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 CRISP2P16562 243 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 RCC1P18754 421 aaPredicted RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 HNRNPH3P31942 346 aaKnown RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 RORAP35398 523 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 HSD17B2P37059 387 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SPAM1P38567 509 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 MAGEA1P43355 309 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TFPI2P48307 235 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 ETV1P50549 477 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 EIF3EP60228 445 aaKnown RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PPP1CAP62136 330 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 ACVR1Q04771 509 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PDIA2Q13087 525 aaKnown RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PDK2Q15119 407 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PAGE3Q5JUK9 113 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TRIM40Q6P9F5 258 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TMEM220Q6QAJ8 160 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TMEM107Q6UX40 140 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SPNS3Q6ZMD2 512 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 CERS6Q6ZMG9 384 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 GLT6D1Q7Z4J2 308 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 NT5DC3Q86UY8 548 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 KRTAP11-1Q8IUC1 163 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TMEM61Q8N0U2 210 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 FAM71E2Q8N5Q1 922 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 COMMD1Q8N668 190 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 CEP112Q8N8E3 955 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 GPR26Q8NDV2 337 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 BPIFCQ8NFQ6 507 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 OR10G9Q8NGN4 311 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 OR2Y1Q8NGV0 311 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PANX1Q96RD7 426 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PEBP4Q96S96 227 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SORT1Q99523 831 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 BPIFA3Q9BQP9 254 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PELOQ9BRX2 385 aaKnown RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 ROGDIQ9GZN7 287 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TRABDQ9H4I3 376 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 ASB8Q9H765 288 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 TMEM185BQ9H7F4 350 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 AUNIPQ9H7T9 357 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SIAEQ9HAT2 523 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 ADAP2Q9NPF8 381 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 EXD2Q9NVH0 621 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 KLHL28Q9NXS3 571 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 ZNF225Q9UK10 706 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 IKZF2Q9UKS7 526 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 CSDC2Q9Y534 153 aaKnown RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PCYT1BQ9Y5K3 369 aaPredicted RBP2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SLC25A15Q9Y619 301 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 MYO18BQ8IUG5 2567 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 NUP205Q92621 2012 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 SPAG17Q6Q759 2223 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 OBSL1O75147 1896 aa2.69□□□□□ -1.98
PTCH1-216ENST00000548379 PRRC2AP48634 2157 aaKnown RBP2.68□□□□□ -1.98
PTCH1-216ENST00000548379 A0A1B0GX78 115 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 KCNK1O00180 336 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 MFSD11O43934 449 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 SLC19A2O60779 497 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 KLF7O75840 302 aaPredicted RBP2.68□□□□□ -1.98
PTCH1-216ENST00000548379 LCA5LO95447 670 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 HLA-DQB2P05538 268 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 C2P06681 752 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 PIRTP0C851 137 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 NR2C1P13056 603 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 CD99P14209 185 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 ZNF43P17038 809 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 MDKP21741 143 aaPredicted RBP2.68□□□□□ -1.98
PTCH1-216ENST00000548379 CA5AP35218 305 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 NSG1P42857 185 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 KCNJ2P63252 427 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 MAB21L1Q13394 359 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 DOC2AQ14183 400 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 PAFAH1B3Q15102 231 aaKnown RBP2.68□□□□□ -1.98
PTCH1-216ENST00000548379 NKAIN1Q4KMZ8 207 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 NCBP2-AS2Q69YL0 99 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 TTC23LQ6PF05 361 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 SASS6Q6UVJ0 657 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 IGFL2Q6UWQ7 119 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 C6orf89Q6UWU4 347 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 FAM151BQ6UXP7 276 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 LRRC74BQ6ZQY2 392 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 ZNF547Q8IVP9 402 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 GTPBP8Q8N3Z3 284 aaPredicted RBP2.68□□□□□ -1.98
PTCH1-216ENST00000548379 TTC29Q8NA56 475 aaPredicted RBP2.68□□□□□ -1.98
PTCH1-216ENST00000548379 OR4C5Q8NGB2 326 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 FAM81AQ8TBF8 368 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 DTX3LQ8TDB6 740 aa2.68□□□□□ -1.98
PTCH1-216ENST00000548379 BLOC1S5Q8TDH9 187 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms